Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0450 ATGAATTTTTATGCTCAAACTTGGAACTCAGTTCCAAATCTTTTGCTTTTGCTTCCTCTAATAATCTCACTTCTCCAATTACAAAATCTTGCCAATAGTTCCCAAAATACAACAAGTGTTGGTGTGATCATTGATGTTAATTCTGAAAGAGGGAAACAACAGAGAACAGCCATGCAAATTGCAGCTCAAAGTTTCAATAATTATTCCAATACTCAAACCATAACCCTACTCTTCTGTGATTCTGGTAGAAACCCTTTACAATCAGCTTCAACTGCTGAAGAATTAATTACTAAAGAGAAAGTTAAAGTCATTATTGGCATGGAAACATGGCAAGAAGCTGCTATTGTTGCTGATGTTGGAGCCATGTTTCAAGTACCAACAATTTCATTTTCTTCTCCATTAGTCCCTTCATCATTAACGCAAACTCGTTGGCCATTCTTGATTCAGATGGCTCAAAATCAAACTGCACAAATAAACTTCATATCTGGTATAATCCATGCTTTCAACTCTCAAAAGGTTATAGCTATATATGAAGAGAACCCTTACAATAGTGATTTTGGAATGTTAAGCCTCTTATCCGAGGCTCTCCAAAAGGTTAACTCCCAGATTGAGTATCAATTAGTTCTTCCACCATTCACTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAATTGTTGAAGTTGTTGAGGCTAAAATCTCGTGTTTTTATTGTACTTCAAGCATCATTACCTATGGTGATCCAATTATTTAGAGAAGCTAATAAAATTGGATTATTGGAGAAAGAATCAACTTGGATAATCAATGAAGAGATTACAAGTATGTTAGACTATGTCGATAAATCAGTTTTATCTTCTATGGAAGGTGTTTTAGGAATCGAACACAACTATTCTTCAAGTTCTAGTGCTTATGGTCAGTTGCAGGAAAGTTTTCAAGCTGAGAACACAAAAACAGTTGAGTCCAAACTAGGATCAAATGTTCTTCTAGCTTATGATAGCATTAAAATTGTTACAAAGGCTTTGGAGAAAATGAATACTAATTCTAGTAGCTCAAAGATGTTATTGGAGGAAATGTTATCTGCAAATTTCAATGGCTTAATTGGTGATATAAGATTCAAAAAAGGAATACTATCCTACATTCCAATGTTAAGAGTCATTAAAGTGGTTGATAATGACAAGAAACATATGGAATTGGATATTTTGACACCAAAGTTTAAGTTTGCTAGATCTCTTCGAGAGAATACATGTGATGGTGGTAAAGAAAGCTTAAATGATTCTGTACCTAAGACATGGAAAGTACCTACTGATACAAATCCTCTAAAAGTTGGAATTCCTATGCATGCTACAATTGATAACTTTTTGAAAGTCTCTGAAAATCAACCTCCTACTGGTTTTTGTATAGATCTTTTCAAAGAGATCAGAGAAATTCTGAGTGACAAGTATTCTGGTCTGCACTATAAATTTTACCCTTTAAATGGATCTTATGATACAATATTGTTTAAAGTCATGGATGAGCAGAAACTGAAGATTCAGCATGGTTGA 1542 0.3398 MNFYAQTWNSVPNLLLLLPLIISLLQLQNLANSSQNTTSVGVIIDVNSERGKQQRTAMQIAAQSFNNYSNTQTITLLFCDSGRNPLQSASTAEELITKEKVKVIIGMETWQEAAIVADVGAMFQVPTISFSSPLVPSSLTQTRWPFLIQMAQNQTAQINFISGIIHAFNSQKVIAIYEENPYNSDFGMLSLLSEALQKVNSQIEYQLVLPPFTSLSDPKGFVLDELLKLLRLKSRVFIVLQASLPMVIQLFREANKIGLLEKESTWIINEEITSMLDYVDKSVLSSMEGVLGIEHNYSSSSSAYGQLQESFQAENTKTVESKLGSNVLLAYDSIKIVTKALEKMNTNSSSSKMLLEEMLSANFNGLIGDIRFKKGILSYIPMLRVIKVVDNDKKHMELDILTPKFKFARSLRENTCDGGKESLNDSVPKTWKVPTDTNPLKVGIPMHATIDNFLKVSENQPPTGFCIDLFKEIREILSDKYSGLHYKFYPLNGSYDTILFKVMDEQKLKIQHG* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0450 513 PANTHER GLUTAMATE RECEPTOR 2 506 - -
Mtr2g0450 513 SUPERFAMILY Periplasmic binding protein-like II 427 499 - -
Mtr2g0450 513 SUPERFAMILY Periplasmic binding protein-like I 35 393 IPR028082 -
Mtr2g0450 513 Pfam Receptor family ligand binding region 55 374 IPR001828 -
Mtr2g0450 513 Gene3D - 435 507 - -
Mtr2g0450 513 Gene3D - 46 374 - -
Mtr2g0450 513 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 506 - -
Mtr2g0450 513 Gene3D - 153 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0450 Mtr-Chr2 4518164 4520421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0450 34 502 Ion Channels AT2G29120 26.953 1.99e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0450 - - mtr:MTR_2g015290 933.71