Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0449 ATGAAACCATTTAGCTGGGAAATATGGATTGCAACTATTGGTATCCTCATCTACACAATGATTATCATTTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGACCAGTGAAAACCCAGATCAGCACCACTATGTGGTTTGCTTTTTCTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACTCAGCAAGAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTCGTTCTAACCTCAAGCTACACCGCAAGTCTTTCATCATTGCTTACTGTCCAAAAATTGAGGTCTGATAGAGATGTTGAATGGCTTAAACAAAATAATTTATCAGTTGCTTGTGAAGACGGCAGTACCTTTATAAAGGACTACTTGGTCCAAGTGCACAATTTCCCTCGGCACCAATTTGTAGAATTTAAGGATGAAGACGACATTGTGGATAAATTCAAGAACAAAAAAATTTCTGCTTACATTGTTGAGAGTCCATATGCGAAGACTTTCTTGAATAAGTACTGCAAAGGTTACACTGCAACTACAGCAGCCTATAAATTTGGAGGACTGGGATTTGTATTTCAAAAAGGGGATCCAATGGCAAAAGACTTTTCTGTAGCAATTTTAACTCTAACAGAAAATGGAAAACTAAAAGCTTTGGAAGATAATTGGTTAACACCTAATAAGGAATGCTCAAGCAACTCAGCATCTCCAGAAACTGAGAGCCTTACCCTTGACAAATTTTGGGTACTCTATTTCATATGTGCTACCACTTCCACAATCTGCTTATTACTAGCTTTATTACAGAAGTACTTCCATAACCATAACAATTGTGAAGAGGAAGCTCACCAACTTTCTCAAGGAAATGTAATCTCTGAACCTAATGTTGATAATAATCACCAACTTACTCAAGGAAATGTAATCGCCGAATCTAATGTTGATAACAATCATCAACTTCCTCAAGGAAACGTAATCTCCGAATCTGATGATGATAATAACAAAGATTTGACAGGAGCATCTAGAAATGGTACAGGCTTATACATTGGAAATCTCATGCCTTTAAATAACGCTGCAACTTATGGTGGAATTGTAATACAAGGTGTACGTCGTCGAAATTCACCAAGGTTGGAGAGTGTAAGCATTTCTGATGAACTGGGCAATCCACAAAGCTCCCAATCAGCTGACATAGAAATGATATAA 1194 0.371 MKPFSWEIWIATIGILIYTMIIIWFLEHHLNPEFGGPVKTQISTTMWFAFSSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTASLSSLLTVQKLRSDRDVEWLKQNNLSVACEDGSTFIKDYLVQVHNFPRHQFVEFKDEDDIVDKFKNKKISAYIVESPYAKTFLNKYCKGYTATTAAYKFGGLGFVFQKGDPMAKDFSVAILTLTENGKLKALEDNWLTPNKECSSNSASPETESLTLDKFWVLYFICATTSTICLLLALLQKYFHNHNNCEEEAHQLSQGNVISEPNVDNNHQLTQGNVIAESNVDNNHQLPQGNVISESDDDNNKDLTGASRNGTGLYIGNLMPLNNAATYGGIVIQGVRRRNSPRLESVSISDELGNPQSSQSADIEMI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0449 397 PANTHER GLUTAMATE RECEPTOR 1 394 - -
Mtr2g0449 397 Pfam Bacterial extracellular solute-binding proteins, family 3 81 224 IPR001638 -
Mtr2g0449 397 Pfam Ligand-gated ion channel 5 255 IPR001320 GO:0015276|GO:0016020
Mtr2g0449 397 MobiDBLite consensus disorder prediction 312 336 - -
Mtr2g0449 397 MobiDBLite consensus disorder prediction 377 397 - -
Mtr2g0449 397 SUPERFAMILY Periplasmic binding protein-like II 79 229 - -
Mtr2g0449 397 Gene3D - 127 228 - -
Mtr2g0449 397 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 394 - -
Mtr2g0449 397 Gene3D - 1 126 - -
Mtr2g0449 397 SMART GluR_14 39 225 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0449 Mtr-Chr2 4515990 4518530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0449 1 280 Ion Channels AT3G51480 34.386 1.44e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0449 - - mtr:MTR_2g015290 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0449 2 4515990 4518530 Mtr2g0449 2 4515990 4518530 ECH