Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0448 ATGAATTTTTATGCTCAAACTTCGAGCTCAGTTCCAAATCTTTTGCTTTGGGTTACTGTAATAGTCTCACTTCTCCTACTCCAATGTCTGGCCAATAGGTCCCAAACTACAAGTGTTGGTGTGGTCATTGATGTTAATTCTGAAACCGGGAAACAACAGAGAACAGCAATGCAAATTGCAGCTCAAAGTTTCAATAATTATTCCCACAATCATAACATAATCCTACTCTTCCGTGACTCTGGTAGAAACCCTTTACATGCAGCTTCAACTGCTGAAGAATTAATTACTAAAGAGAAAGTTAAAGTCATTATTGGCACGGAAACATGGCAGGAAGCGTCTATTATGGCTGATGTCGGAGCCATGTTTCAAGTACCAACAATTTCATTTTCCTCTTCATTAGTCCCTTCATCATTAATGCAACTTCGTTGGCCATTCTTGATTCAAATGGCTCAAAATCAAACTGCACAAATGAAATTCATATCTGATATAATCCATGCTTTCAACTCTCAAAAGGTTATAGCTATATATGAAGACAACCCTTATAATAGTGATTCTGGAAGGTTAAGCCTCTTATCCGAGGCTCTCCAAAAGGTTAACTCCCAGATTGAGTATCAGTTAGTTCTTCCTTCATTCACTTCTTTGTCTGATCCAAAAGGGTTTGTTCTTGATGAATTGTTGAAGTTGTTGCCGCTAAAATCTCGTGTTTTTATTGTACTTCAAGCATCGTTAGCTATGGTGAATCATTTGTTTAGAGAAGCTAAGAAAATTGGATTATTGGAGAAAGAATCAACTTGGATAATCAATGAAGAGATTACAAGCATGTTAGAGTATGTCGATAAATCTGTTTTATCTTCCATGGAAGGTGTTAGGGGAATCGAACTCAACTATTCTATAAGTTCCAGTGCTTATGCTCAGTTGCAGGAAAGTTTTCAAGCTGAGAACACAAAAACAGTCGAGTCCAAACCAGGATTAAATGCTTTGCTAGCTTATGATAGCATTACAATTGTTACAAAGGCTTTGGAGAAAATGAATAGTAATTCAAGTAGCTCAAAGATGTTATTGGAGGAAATGTTATCTTCAAATTTCAATGGCTTAATCGGCGATATAAAATTCAAAGAAGGAAAACTATCCTACACTCCAATACTAAGAGTCATAAAAGTGATTAATAATGATAAGAAACATATTGAACTGAACTCTTGGACACCAAAGTTGAAGGTGTCTAGATCTCTTAGAGAGAAAGCAAGTGATGATACTACAGAAACCAAGACATGGAAAGTGCCTACTGATATAAATCCTTTAAAAGTTGCAATTCCAACGAATCCATCATATGATAACTTTTTGAAAGTCTCTAAGAATCAACCTCCTACCGGATTTTGTATCGATCTTTTTAAAGAGATCAGAGAAATTCTGAGTGACCAGTATTCTGGTCTTCCCTATAAATTTTACCCTCTCAATGAATCTTATGATACAATTCTGTTTAAAGTCATGGATAAGACCTATGATGCTATTGGAGCAGATGTAACAATACTTGCCGAACGATCCAGGAATGTATCATTCACTCAACCATATACTGAGTCAGGTTTATCACTTATATTTCCGGCAGAAACTGAAGATTCAGCATGGTTGATTATGAAACCATTTAGCTGGGAAATATGGATTGCAACTATTGGTATCCTCATCTACACAATGATTATAATCTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGCGGACCATTGAAAACTCAGATCAGCACCACTATGTGGTTTGCTTTTTCTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACACAGCAAGAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACCGCAAGTCTTTCATCATTGCTTACTGTCCAAAAATTGAGGTCTGATAGAGATGTTGAATGGCTTAAACAAAATAATCTATCAGTTGGTTGTAATAACAGAAGTACCTTTGCAAAGGACTACTTGGTCCAAGTATACAATTTCCCTCGGCACCAAGTTGTAGATATTCAGGATGAACATGACGTTGTGGATAAATTCAAGAACAAAAAAATTTCTGCTTACATTGTTGAGAGTCCATATGCGAAGATTTTCTTAAATAAGTACTGCAAAGGTTACACTGCAACTACAGCAGCCTATAAATTTGGAGGACTGGGATTTGTATTTCAAAAAGGGGATCCAATGGCAAAAGACTTTTCTGTAGCAATTTTAACACTAGCAGAAAATGGGAAACTAAAAGCTTTGGAAGATATTTGGCTAACACCTAAGGAATGCTCAATGAACTCAACATCTTCAGAAACTGAGAGCCTTACCCTTGACAAATTTTGGGGACTCTATTTCATATGTGCTACCACTTCCACAATCTGCTTATTACTAGCTTTATTACAGAAGTACTTCTATAACCATAACAACTGCGAAGAGCAAGCTCATCAACTTTCTCAGGGAAATGTAATCACAGAACCTAATGTTGATAATAATCACCAACTTACTCAAGGAAATGTAATCACCGAATCTAATGTTGATAACAATCATCAGCTTCCTCAAGGAAACGTAATCTCCGAATCTGATGATGATAATAACAAAGATTTGACAGGAGCATTTAGAAATGGTACAGGCCTATACATTGGAAATCTCATGCCTTTAAATAATGCAGCAACTTATGGTGGAAGTGTAATACAAGGTGTACGTCGTCGAAATTCACCAAGGTTGGAGAGTGTAAGCATTTCTGATGAACCGGGCAATCCACAAAGCTTACAATCAGCTGATATAGAAATGATGTAA 2820 0.3638 MNFYAQTSSSVPNLLLWVTVIVSLLLLQCLANRSQTTSVGVVIDVNSETGKQQRTAMQIAAQSFNNYSHNHNIILLFRDSGRNPLHAASTAEELITKEKVKVIIGTETWQEASIMADVGAMFQVPTISFSSSLVPSSLMQLRWPFLIQMAQNQTAQMKFISDIIHAFNSQKVIAIYEDNPYNSDSGRLSLLSEALQKVNSQIEYQLVLPSFTSLSDPKGFVLDELLKLLPLKSRVFIVLQASLAMVNHLFREAKKIGLLEKESTWIINEEITSMLEYVDKSVLSSMEGVRGIELNYSISSSAYAQLQESFQAENTKTVESKPGLNALLAYDSITIVTKALEKMNSNSSSSKMLLEEMLSSNFNGLIGDIKFKEGKLSYTPILRVIKVINNDKKHIELNSWTPKLKVSRSLREKASDDTTETKTWKVPTDINPLKVAIPTNPSYDNFLKVSKNQPPTGFCIDLFKEIREILSDQYSGLPYKFYPLNESYDTILFKVMDKTYDAIGADVTILAERSRNVSFTQPYTESGLSLIFPAETEDSAWLIMKPFSWEIWIATIGILIYTMIIIWFLEHHLNPEFGGPLKTQISTTMWFAFSSLFFAHKEKINSNTARVVVGVWLFLVFVLTSSYTASLSSLLTVQKLRSDRDVEWLKQNNLSVGCNNRSTFAKDYLVQVYNFPRHQVVDIQDEHDVVDKFKNKKISAYIVESPYAKIFLNKYCKGYTATTAAYKFGGLGFVFQKGDPMAKDFSVAILTLAENGKLKALEDIWLTPKECSMNSTSSETESLTLDKFWGLYFICATTSTICLLLALLQKYFYNHNNCEEQAHQLSQGNVITEPNVDNNHQLTQGNVITESNVDNNHQLPQGNVISESDDDNNKDLTGAFRNGTGLYIGNLMPLNNAATYGGSVIQGVRRRNSPRLESVSISDEPGNPQSLQSADIEMM* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0448 939 MobiDBLite consensus disorder prediction 916 939 - -
Mtr2g0448 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 936 - -
Mtr2g0448 939 Gene3D - 541 674 - -
Mtr2g0448 939 Gene3D - 47 379 - -
Mtr2g0448 939 SUPERFAMILY Periplasmic binding protein-like I 35 392 IPR028082 -
Mtr2g0448 939 PANTHER GLUTAMATE RECEPTOR 2 936 - -
Mtr2g0448 939 MobiDBLite consensus disorder prediction 852 876 - -
Mtr2g0448 939 SMART GluR_14 434 768 IPR001320 GO:0015276|GO:0016020
Mtr2g0448 939 PIRSF IGluLR_plant 9 882 IPR017103 -
Mtr2g0448 939 Gene3D - 152 394 - -
Mtr2g0448 939 MobiDBLite consensus disorder prediction 852 867 - -
Mtr2g0448 939 Pfam Receptor family ligand binding region 54 374 IPR001828 -
Mtr2g0448 939 Pfam Bacterial extracellular solute-binding proteins, family 3 441 767 IPR001638 -
Mtr2g0448 939 Gene3D - 429 540 - -
Mtr2g0448 939 SUPERFAMILY Periplasmic binding protein-like II 422 768 - -
Mtr2g0448 939 Pfam Ligand-gated ion channel 768 797 IPR001320 GO:0015276|GO:0016020
Mtr2g0448 939 Gene3D - 700 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0448 Mtr-Chr2 4510214 4515071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0448 17 817 Ion Channels AT2G29120 30.974 5.00e-119 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0448 - - mtr:MTR_2g015290 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0448 2 4510214 4515071 Mtr2g0448 2 4510214 4515071 ECH