Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0447 ATGCATTACCTTTCAACTTTTCCTCAAGCACTTGCAAGAATATGGCTATTCTTTGTCTTACTCGTCCCTTTTGCTCTCATTTACGGTATCCGAGATGAAACTATGAATTCAGACAACAAAGTTATATCCATCGGGGTGATCATTGATGGTGATTCTCGTATTGGGAAAGAACAAGAAGTAGCCATGGACATTGCAGCCCAAAGTTACAACAACACTTCAAAGAACTACAAGTTAGCTCTCTACTTCAAGAACTCCACAAAGGATACCCTCAAGGCCATCAAAATTGCCGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGGATGCAAACATGGCAAGAAGCAGCTATGGTGGCTGAAGTAGGAAGCAAAGCTCAAGTTCCAGTCATATCCTTTGTAGCTCCTACCATTACCCCACCATTGATGGAAGCTCGGTGGCCTTTTCTGGTGAGACTAGCTAACACTGGTACAGCATATATAAAATGCATTGCAGAAATAGTGCAGGCTTATAGCTGGAAGAAAGTAGTAGTAATCTACGAAGATAACGGGTACGGTGGAGATTACGGGATGCTAGCTCTGCTAGCTGAGGCACTTCAGGACGTGGACTCAATGATCGAGCACCGCTTAGTCCTTCCACCAATTTCTTCTCTACAGGATCCAGAAGAGCTAGTTAGTGAAGAGATGCTAAAGTTAAAACAAACACAGTCTCGCGTTTTCATAGTGCTGAAATCATCATTAGAAATGGCAATTCATGTGTTCAAAGAAGCTTCAAAAGTTGGACTAGTGGATAAAGAATCGGCTTGGATGATCCCGGAGAGCATAGCTAATTTGCTGGACTCTGTCAATAAGTCTGCTATATCTTATATGGAAGGTGCTTTAGGAATTAAGACCTACTACTCGGAAAGAAGCAGGGAGTATAAAGAATTTGAGGCTCAATTCCGGAGAACGTTTTGGTCAAAGAATCCAGAGGAAGATAACCGATACCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAACATTGTAACTCAAGCTTTGAACAGAATGACCAGTAGGAAGAATAGCAGCCCAAAGACTTTACTAAGAGAAATACTTTCTTGCAATTTCCTTGGTTTAAGTGGCCATATTCAACTTGAATCTGGCCAACTCATGCAGAAGAATCTTGTCTTAAGGATAGTAAATGTGGCTGGGAAGAGTTACAAGGAATTATGCTTTTGGACTCAACAACATGGATTTACTACAATCCACCATGCAGGACAAGGTGGAAATAAGGTTGCTGGAAATACAAAATGTTTCAGGGGTGTACGGTGGCCTGGGAATTGGGCCCGTATTCCAAAGGGCTGGAACATGCCCACAGAAAAAAATCCATTGAGAATTGCAGTCAGAAGCAGAACCTCGTTTTCCAGGTTTGTCAAGGTTGTGTATGGCCAGAATGGAGAGCCTGATAAATATACTGGATTCTGCATTGAAATTTTTGAGCATGTACTGAACCATTTGGGGTACGATCTGCCATATAGTTATTATCCCATCGATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGACTTATGATGCTGTTGTTGGGGACATGACCATAATAGAGGAAAGGTTGCCGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCGATGAAGCCTGGAGAGTCAGCATGGATGTTTATGAAGCCATTTACCTTGGAATTATGGCTGGTTACAGGTGCAATCTTGATTTACACAATGTTAGTTGTTTGGTATCTCGAGAGAGAACCGAACCCAGAGTTTCAGCTCAGTACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTCGCTCATAGGGCAGAAATGCACAGCAACTTAACTCGAGTTGTGATGGTCTCATGGCTCTTTCTTGTATTGATTGTCACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTCACAGTTAAACAGTTGCGACCAAATGTAACAGACATTCAGTGGCTGAAGAACAACAACAAGAAAATTGGTTGTGACGGCGACTCATTTGTTAGGACGTTCCTAGAGAAAGTTGAAAAGTTCAAGCCAGAGAATATCATAAACATTACCGATGAATACAAATATAATGATGCATTCTCTAATAACAGCATAGCAGCTGCTTTTCTTGAGCTCCCATATGAAAAAGTATTTGTCAGTAAATACTGCAAGAGATACACTGGCTTCACTCCTAGAACTAGATTTGGAGGATTTGGATTTATGTTCCAGAAAGGCTCTCCCCTTGTGAAAGATGTATCGAAAGCTATATTGCATCTCTCAGAAAAGGCAGAGTTGAAAAGATTGGAAGAAAAGTGGTTAATTAGCTCACAGGATTGCTCCAACAACGTTACATCCTCGAACGAGACGAATAGTTTGAATCTTGGAAGCTTATGGGTCCTATATGTCATGTCTGGTGCTACTTCTACTATTTGTGTGCTAATACAAACCATCAAGTGGCTAAAATCCAATCAGCCACATGAAGACTTGCCACCAGAAGAAGGTAATGGCACGCCAAGTGATGAAAGGGTGTGGAAAAAGGCGATTACATTTGCAAAGCAGATTTATAGCAAAAAGCACAATAATTCAAGCAAGGAACAAGATGTAATCGACTGTTCTTCGAGATCAGGTCATGCGAGCATCGCTGATACTCCTGAGCATTCAGAGGAACTCGCTTCTATACCAAAAGACGTACATATTACACCATATAACATAGGAACTTTAGAACCACATACACTTCAAAATAATTGTCATATCAGACACTGTACAAACCAACTTTAA 2826 0.4084 MHYLSTFPQALARIWLFFVLLVPFALIYGIRDETMNSDNKVISIGVIIDGDSRIGKEQEVAMDIAAQSYNNTSKNYKLALYFKNSTKDTLKAIKIAEEMINVQKVQVIIGMQTWQEAAMVAEVGSKAQVPVISFVAPTITPPLMEARWPFLVRLANTGTAYIKCIAEIVQAYSWKKVVVIYEDNGYGGDYGMLALLAEALQDVDSMIEHRLVLPPISSLQDPEELVSEEMLKLKQTQSRVFIVLKSSLEMAIHVFKEASKVGLVDKESAWMIPESIANLLDSVNKSAISYMEGALGIKTYYSERSREYKEFEAQFRRTFWSKNPEEDNRYPGFYALQAYDSINIVTQALNRMTSRKNSSPKTLLREILSCNFLGLSGHIQLESGQLMQKNLVLRIVNVAGKSYKELCFWTQQHGFTTIHHAGQGGNKVAGNTKCFRGVRWPGNWARIPKGWNMPTEKNPLRIAVRSRTSFSRFVKVVYGQNGEPDKYTGFCIEIFEHVLNHLGYDLPYSYYPIDGTYNDLVQLVYNKTYDAVVGDMTIIEERLPYVDFTVPYAESGLSMIVPMKPGESAWMFMKPFTLELWLVTGAILIYTMLVVWYLEREPNPEFQLSTALWFTFSSLFFAHRAEMHSNLTRVVMVSWLFLVLIVTSSYTASLSSMLTVKQLRPNVTDIQWLKNNNKKIGCDGDSFVRTFLEKVEKFKPENIINITDEYKYNDAFSNNSIAAAFLELPYEKVFVSKYCKRYTGFTPRTRFGGFGFMFQKGSPLVKDVSKAILHLSEKAELKRLEEKWLISSQDCSNNVTSSNETNSLNLGSLWVLYVMSGATSTICVLIQTIKWLKSNQPHEDLPPEEGNGTPSDERVWKKAITFAKQIYSKKHNNSSKEQDVIDCSSRSGHASIADTPEHSEELASIPKDVHITPYNIGTLEPHTLQNNCHIRHCTNQL* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0447 941 SMART GluR_14 459 791 IPR001320 GO:0015276|GO:0016020
Mtr2g0447 941 PANTHER GLUTAMATE RECEPTOR 3.4 22 912 - -
Mtr2g0447 941 CDD PBP1_GABAb_receptor_plant 43 416 IPR044440 -
Mtr2g0447 941 Gene3D - 728 797 - -
Mtr2g0447 941 Gene3D - 454 569 - -
Mtr2g0447 941 CDD GluR_Plant 458 789 - -
Mtr2g0447 941 Gene3D - 157 413 - -
Mtr2g0447 941 Pfam Bacterial extracellular solute-binding proteins, family 3 483 789 IPR001638 -
Mtr2g0447 941 Gene3D - 570 701 - -
Mtr2g0447 941 MobiDBLite consensus disorder prediction 874 905 - -
Mtr2g0447 941 PIRSF IGluLR_plant 9 919 IPR017103 -
Mtr2g0447 941 MobiDBLite consensus disorder prediction 882 896 - -
Mtr2g0447 941 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 912 - -
Mtr2g0447 941 Pfam Ligand-gated ion channel 790 821 IPR001320 GO:0015276|GO:0016020
Mtr2g0447 941 SUPERFAMILY Periplasmic binding protein-like I 39 451 IPR028082 -
Mtr2g0447 941 Gene3D - 50 388 - -
Mtr2g0447 941 SUPERFAMILY Periplasmic binding protein-like II 438 790 - -
Mtr2g0447 941 Pfam Receptor family ligand binding region 59 391 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0447 Mtr-Chr2 4504981 4508819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0447 17 836 Ion Channels AT2G29120 32.791 2.11e-144 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0447 - - mtr:MTR_2g015270 1802.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0447 2 4504981 4508819 Mtr2g0447 2 4504981 4508819 ECH