Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0446 ATGAGCCCGTGTATTGCAGCCGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGGATGCACACATGGCCAGAAGCAGCTATAATGGAAGATATAGGAAGCAAAGCTCAAGTTCCTATCATATCCTTTGCAGCACCTACCATTACCCCACCTTTGATGAATAATCGATGGCCTTTTCTAACCGGAATTCACAACATAATCTACAAAGATGATGGGTATGGTGGAGATTATGGGATGCTAACCCTGTTAGGTGAAGCCCTTCAAGATGTGGATTCAATGATTGAGCACTGCTTAATCCTTCCCTTGATTTCTTCTCTACATGATCCAGGAGAGCTAATTAGTAAAGAGATGATTAAGTTAACCCAAACACAGTCTCGTGTGTTCATAGTGCTGCAATCATCATTAGAAATGGAAATTCATGTGTTCAAAGAAGCTTCAAAAGTTGGACTAGTGGATAAAGAATCGGTTTGGATGATCCCGGAGAGCATAGCTAATTTGCTGGACTCTGTCAATAAGTCTGCTATATCTTATATGGAAGGTGCTTTAGGAATTAAGACCTACTACTCGGAAAGAAGCAGGGAGTATAAAGAATTTAAGGCTCAATTCCAGAGAACGTTTTGGTCAAAGAATCCAGAGGAAGATAACCGATACCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAACATTGTAACTCAAGCTTTCAACAGAATGACCAGTAGGAACAATAGCAGCCCAAAATTTTTACTAAGCGAAATACAGTCTAGCAATTTCATTGGTTTAAGTGGCCATATTCAACTTGAAGCTGGACAAGTCATGCAGAAGAATCTTGTCCTAAGGATAGTTAATGTGGCTGGGAAAAGTTACAAGGAATTATGTTTTTGGACCGAACAGCATGGCTTCACTACAATCAACCATGCAGGACAAGGTGGAAATAAGGTTACTGGAAAAACAGAATGTTTCAGGGGTGTCCACTGGCCTGGGAATTTAGACCGTGGTCCAAAGGGCTGA 1020 0.4059 MSPCIAAEEMINVQKVQVIIGMHTWPEAAIMEDIGSKAQVPIISFAAPTITPPLMNNRWPFLTGIHNIIYKDDGYGGDYGMLTLLGEALQDVDSMIEHCLILPLISSLHDPGELISKEMIKLTQTQSRVFIVLQSSLEMEIHVFKEASKVGLVDKESVWMIPESIANLLDSVNKSAISYMEGALGIKTYYSERSREYKEFKAQFQRTFWSKNPEEDNRYPGFYALQAYDSINIVTQAFNRMTSRNNSSPKFLLSEIQSSNFIGLSGHIQLEAGQVMQKNLVLRIVNVAGKSYKELCFWTEQHGFTTINHAGQGGNKVTGKTECFRGVHWPGNLDRGPKG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0446 339 Gene3D - 70 227 - -
Mtr2g0446 339 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 339 - -
Mtr2g0446 339 Pfam Receptor family ligand binding region 115 280 IPR001828 -
Mtr2g0446 339 Gene3D - 6 63 - -
Mtr2g0446 339 SUPERFAMILY Periplasmic binding protein-like I 6 299 IPR028082 -
Mtr2g0446 339 PANTHER GLUTAMATE RECEPTOR 3.4 5 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0446 Mtr-Chr2 4502292 4504178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0446 6 339 Ion Channels AT2G24720 27.778 5.19e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0446 - - mtr:MTR_2g015270 543.117