Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0443 ATGATATCTATTTCTCTAATTCCTCATTTATGTGTTTATACCAACATGGAAAATATTCACATTCACATTCCCAATAGTAATGATCATCATGCAACTTCTGAAGGGTCTATTCTTGAGAATATATGGGCTAAAATTACCAGCAGTGATGCAAGAACAAATGGAAATGAAGCAGAATGTTCTAACACATGGGAAGAATTGCCTAATCTTGGCGAAAGAGATGGATCGATGGAAATACTTCAAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCAGATTACTGGGAAGAGCTTTTAGATGATATTCTACCAATTAATGCAATAAGCAATAAAGAAGATTTTTCATGCAACAAAAAGATGGAAATTGAAAGTGTGAATAAATCAAAGGAAAAAGTAGAAGAAGATGGTGTGAGAAAAGAGAAAAAAAGAGTTGAAAAACATTATAGAGGAGTAAGGAGAAGGCCATGGGGAAAATATGCAGCTGAAATTAGAGATTCATCAAAGAAAGGTTCAAGAGTTTGGCTTGGTACATTTGATACAGCTGAACAAGCTGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTTCAAAAGCATGTCTTAATTTCCCAATTGAGAGTGTTGCAAATACAAATACTTTAGGATATGGTAAGAAAGGAATTGTTGATGTTACAAAGAGAGAAAGTTTATTGGATTCAAGGAAGAGAGGATTAAGGGATAGAGGAGAATTTGTTGATGTGATGAATATTGAAGAAACTGCAAACAAAAAGATGGCAGTGTTGGAATTGGAAGACATGTTAGAAAATGATGTTTTTGTATTTCAGGACCTAGGAATTGATTACTTGGACAGTTTGCTCTCATCTTTTTGA 876 0.3425 MISISLIPHLCVYTNMENIHIHIPNSNDHHATSEGSILENIWAKITSSDARTNGNEAECSNTWEELPNLGERDGSMEILQRLPSLGRWISMGADYWEELLDDILPINAISNKEDFSCNKKMEIESVNKSKEKVEEDGVRKEKKRVEKHYRGVRRRPWGKYAAEIRDSSKKGSRVWLGTFDTAEQAALAYDKAALRIRGSKACLNFPIESVANTNTLGYGKKGIVDVTKRESLLDSRKRGLRDRGEFVDVMNIEETANKKMAVLELEDMLENDVFVFQDLGIDYLDSLLSSF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0443 291 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 39 291 - -
Mtr2g0443 291 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 SMART rav1_2 148 212 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 CDD AP2 147 207 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 ProSiteProfiles AP2/ERF domain profile. 148 206 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 Pfam AP2 domain 148 198 IPR001471 GO:0003700|GO:0006355
Mtr2g0443 291 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 39 291 - -
Mtr2g0443 291 Gene3D AP2/ERF domain 147 208 IPR036955 GO:0003700|GO:0006355
Mtr2g0443 291 SUPERFAMILY DNA-binding domain 148 207 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0443 Mtr-Chr2 4438807 4439718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0443 34 291 AP2-EREBP Transcription Factor Family AT4G18450 34.579 1.70e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g0443 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0443 - - lang:109334345 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0443 2 4438807 4439718 Mtr2g0443 2 4438807 4439718 ECH