Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0442 ATGGTTTTATTATCACAATCCCAACCAGAATTACCCTTAAACGAGAATGACTCACAAGACATGGTTATATACCAAATCCTAAACGAGGCTAATGCCTTAACCAACACATATGTACCACATAGAAACCACCACCATCAAGCCATGTTGAGTTGCTTAGAACCAACGAAGACTATTGCCAAGAAGCACTATAGAGGAGTAAGGCGTCGTCCTTGGGGGAAATATGCGGCGGAGATTCGTGACTCGGCTCGTCATGGAGCTAGAGTATGGCTTGGAACATTCCAAACAGCTGAAGAAGCTGCTATGGCTTATGATAGAGCTGCTTTCAAAATGAGAGGTTCAAAGGCTTTGCTTAATTTCCCAGCTGAAACTGTTGCTGCAGCTTCCATGCAAATCGAATTTTCTAATTCTAAGCTTAACTTGAATAATAGTAATAGTAATAATCATCATGATTCTGAATCAAGTGCTAGCAGCTAG 474 0.4114 MVLLSQSQPELPLNENDSQDMVIYQILNEANALTNTYVPHRNHHHQAMLSCLEPTKTIAKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAETVAAASMQIEFSNSKLNLNNSNSNNHHDSESSASS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0442 157 SMART rav1_2 62 126 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 CDD AP2 61 121 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 PANTHER DNA-BINDING DOMAIN 6 136 IPR044808 GO:0003700|GO:0009873
Mtr2g0442 157 Gene3D AP2/ERF domain 61 122 IPR036955 GO:0003700|GO:0006355
Mtr2g0442 157 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 6 136 - -
Mtr2g0442 157 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 ProSiteProfiles AP2/ERF domain profile. 62 120 IPR001471 GO:0003700|GO:0006355
Mtr2g0442 157 SUPERFAMILY DNA-binding domain 62 121 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0442 Mtr-Chr2 4436511 4437379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0442 11 134 AP2-EREBP Transcription Factor Family AT3G23240 50.781 8.84e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g0442 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0442 K13433 - gmx:100811533 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0442 2 4436511 4437379 Mtr2g0442 2 4436511 4437379 ECH