Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0422 ATGGCATGGTGCAATGATAAAGATAACAACAACTCTGATGTCACTGATAACATAAAGCTCAATGAAGAAATTGATCAAAATCAAACCATAGAATGCCCCTCATGCGGCCATAATATTGAAGTAAAAAATCAGGGTGGAGTTAATGAATTGCCGGGGTTACCAGCTGGAGTGAAATTTGACCCAAGTGATGTAGAAATACTAGAGCATTTAGAAGCAAAAGTGATGTCTAATGTCTCCAAGCTTCATCCACTTATTGATGAGTTCATACCAACGATTCAAGGAGAGAATGGAATTTGTTATACACACCCAGCACAACTACCAGGAGTTAGCAAAGATGGTCAAATTCGCCACTTTTTTCATAGGCCTTCAAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAATTGAAACAAGATGGCACAAAACAGGGAAAACTAGAGCAATTTTTTCCAATGGTGTTGTGAAGGGATTTAAGAAGATATTGGTACTCTACACCAACTATTGCAAAGATGGAAAACCAGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGTATGAATGAAGAAGAAAGAGATGGAGAATTCGTTGCTTCAAAGATCTTCTACCAGACACAGCCTAGACAACATGGTAGTAATTCCATTAATAATGTAAGAGATTCATATGAAAAAATAATCAACAAAGGAAGTGACCATGGTAATAACAGTGCAGCCCCCAACAATGTAGCTCATGTGGAATGCTACAATGCTTGTTATACAAATTATGACAATATGCATGTTGGTCATAGTAGGGAAAGCACTCCACAACTGATTATACCAAACATGGCTGTTCAAAGTAATGGAACTATTATTCCCTTATCAATGGATCATGCAAACAAAGTAAGAGTGCTGGAGAGAAAGTAA 927 0.3754 MAWCNDKDNNNSDVTDNIKLNEEIDQNQTIECPSCGHNIEVKNQGGVNELPGLPAGVKFDPSDVEILEHLEAKVMSNVSKLHPLIDEFIPTIQGENGICYTHPAQLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGIETRWHKTGKTRAIFSNGVVKGFKKILVLYTNYCKDGKPEKTNWVMHQYHLGMNEEERDGEFVASKIFYQTQPRQHGSNSINNVRDSYEKIINKGSDHGNNSAAPNNVAHVECYNACYTNYDNMHVGHSRESTPQLIIPNMAVQSNGTIIPLSMDHANKVRVLERK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0422 308 Pfam No apical meristem (NAM) protein 54 193 IPR003441 GO:0003677|GO:0006355
Mtr2g0422 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 289 IPR044799 GO:0003700
Mtr2g0422 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 289 - -
Mtr2g0422 308 Gene3D NAC domain 62 216 IPR036093 GO:0003677|GO:0006355
Mtr2g0422 308 SUPERFAMILY NAC domain 48 212 IPR036093 GO:0003677|GO:0006355
Mtr2g0422 308 ProSiteProfiles NAC domain profile. 53 212 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0422 Mtr-Chr2 4252201 4255192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0422 1 250 NAC Transcription Factor Family AT1G28470 58.596 4.05e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g0422 NAM 2.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0422 - - cam:101512871 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0422 2 4252201 4255192 Mtr2g0422 2 4252201 4255192 ECH
Mtr2g0422 2 4252201 4255192 Mtr4g2915 4 42789441 42793331 ECH