Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0421 ATGAACCTTGGGGAACATATTGCTTATGACACAGTCATGGCTATTCTATCAATATCTCTCATAATTCTTGGTATTTTCCTCTTTTTTTCTTGCAAGAAGAAACCAGTTGAATCAGAAGAAACACTTCCAGTGAAACAAATTGCTCTTTTATACCCTTTAACAGTTATTGATATTGCTACAAATGGCTTCAACCATAGGAGAATCATTGGAAAAGGTCGTTTAGGAACAGTTTATGCTGGTAAACTCGAAAATGAAGAGCTTGTAGCTGTGAAACGCATTCATTCTGTTCTTGTGTTAAGCAACGCAGGTTTTGGTTTTTCATCTGTGATGAAATGGCTCTCTTTATCTCAACACCCTAACGTTGTTCCTATAATAGGATTCTCAGAAGCACCAGGTGAAAGAGTTATATTGATGGAGTTTGTTCGAATGGCGAATTTGGAATTTTACTTGCATGAGAATCAAGATGGTGGTTCTTCTTCACTTTTGGATTGGAACAAGAGGTTTAAGATTGCAGCTGGAGTAGCTAAAGGGCTACAATATCTTCATGAAGTGGTAGCACCAAATATTGTACATGGTTGTGTTAAATCTTCTAATGTTCTTATTGATGTTAATTTTTGTGCTAAAATATCTGATTATGGACTTAGTTTTTTGGGGGGTGTAGAAAAGAGAGGGTTAGTTGGTTATGTGGATGATGAATATTGGAATGAAGGAATTAGGGGTGGTAGTGTTTGTAAGGAAAATGATGTTTATGGGTTAGGGGTGATTTTGTTGGAGCTTTTAAGTGGAAGAGGGTGTGAAGGTGGATTATTGGTAAAATGGGTTTTGCCTTTGATTAAGGATATGAGATTTAGTGAAGTTTTGGATCCTAGGTTGATTATTCCTTCTAATATGAATGCTATTATTAGATTAGCAAAAGTTGCTTCTGCTTGTGTTGGTAATCCAAGGAAATGTAGACCTTGTGTGAACCATGTGATGAACATTTTGAATGATTTAGAGATGGAAGTGTGTCTCTTATCAAATTGA 1023 0.3597 MNLGEHIAYDTVMAILSISLIILGIFLFFSCKKKPVESEETLPVKQIALLYPLTVIDIATNGFNHRRIIGKGRLGTVYAGKLENEELVAVKRIHSVLVLSNAGFGFSSVMKWLSLSQHPNVVPIIGFSEAPGERVILMEFVRMANLEFYLHENQDGGSSSLLDWNKRFKIAAGVAKGLQYLHEVVAPNIVHGCVKSSNVLIDVNFCAKISDYGLSFLGGVEKRGLVGYVDDEYWNEGIRGGSVCKENDVYGLGVILLELLSGRGCEGGLLVKWVLPLIKDMRFSEVLDPRLIIPSNMNAIIRLAKVASACVGNPRKCRPCVNHVMNILNDLEMEVCLLSN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0421 340 SUPERFAMILY Protein kinase-like (PK-like) 41 328 IPR011009 -
Mtr2g0421 340 Pfam Protein tyrosine and serine/threonine kinase 66 327 IPR001245 GO:0004672|GO:0006468
Mtr2g0421 340 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Mtr2g0421 340 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 336 - -
Mtr2g0421 340 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0421 340 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 336 - -
Mtr2g0421 340 Gene3D Transferase(Phosphotransferase) domain 1 143 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0421 Mtr-Chr2 4242238 4243521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0421 40 329 Receptor kinase-like Gene Family AT3G59420 35.526 2.70e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr2g0421 PK_Tyr_Ser-Thr 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0421 - - mtr:MTR_2g014650 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0421 2 4242238 4243521 Mtr2g0421 2 4242238 4243521 ECH