Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0415 ATGGAAGCTGAAGCAGAGAATAATTCCCAGAAGGGTGATGATGGGGGTGAAAATAGTAATGAAAATTTCAACAACAATGGAAGTAACAACAAGATTGTGAGTTCAAGTGAAGGTCAAAGCAAACCTAAGAGACAGATGAAAACCCCTTTTCAGCTTGAAATGCTTGAGAAAGCTTATGCTTTGGAGACATATCCTTCGGAGACAACAAGGATAGAGCTGTCTGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCAGTTAAGAAGGCGCGAAAGGCGCCACCTTTACTGGATTCTCCTACTCATGAGCCTAATCCTAAGTTGATTCTTGAGCCTTGTAATGAATATGGATCCGGGTCAGGTTCGGGGTCTAGCCCGTTTGCCCGGACGGAGTTGAGGAATGTGGTGCCTCCTCCAAGGAGTTATTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCTATTTTGGGAATCGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGCAATGGCAAGGACATTCCCTGAATATCCGTTTGTTCCGAACCAGCCTAGCATTAGATCTGATATGTTTGGACAATTGAGTCAACCCCATTTATACGATCCAATGGAGGGTCCTGCCAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAATTCATGGAACTCAAAGCCAGTCTTCCCGTGCTCGCCTATCATCTCAACATGACAAGCCAGTGACTCCCTATACTTCCCCTCCTCCCTTTTTGTCTCAGCAGGACAAGCAATCAATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCCAAAAGGGAACCTCACCCAAACATAGCCAATACTGGCATTAACTCCCAATTCACTGATCACCAAATTGGTGGACAAGAAAATCCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGACACGGTCTTGCGGGTGGAGAAGAAACGAAAGACTGACGATGCCAGAGTTGTCAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCCTAAGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGGCTAGATCGTGAGAGAAGGAAGGAAGAAGAAAGGATGATGCGTGAGAGGCAGAGAGAAGAGGAAAGATTGAAGCGTGAGCAAAGGCGGGAGATAGAACGAAGGGAAAAATATATGATCAAAGAACATTTAAGAGCCGAGAAAAGGAAGCAAAAGGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAGTCTACGGAGCTCATTGAGGATGAACAGTTAGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTTTCTTCTATTATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCTAAAAGTGTAAAGCTAAAAAAGCCATTTGCTATCCAGCCCTGGATCAACTCGGAACAAGATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATCACCTTTGCTGATGCTCTTGAGTTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAATGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGATTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCACAGTTGAAAAAAAGAAGCATTACCTGGTCATGTGCAAATGATAAAGAAGAGGGAAGAAGTGGTGATGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCCGTAAGTGCAGTGGCAAAAATGCGAGAGAAAGGTTTATTAGCTCCTCGAAGATCGAGACACAGGTTAACTCCAGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCTCTTGAGGGCCCCAAAGGTTTGAATGTACTAGAGCTTGCAGAGAAGATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCGGTTGCTTTGACAAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGACAGGATCCTGCAGATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGTTGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGACGAAGTTGATGAGGATCCTGAAGACGATGATTTGGTAAATCCTTCAAGTGGAAACCAAAATTCAGTACAATACGATAATATGGATATTAGTTTGGTAAATGTAAAAGAAAATTTGGCCAATGATGTAGACCTTATTCAAAATAAACTTGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCCGATTGTCCCACTTCTGTCACCAGACAACCAGTTGCTTGTGAAAATCTAAATGCCAGAAATCTTGATGATAATATGGAAATCGATGAAAGCAAGTCTGGAGAACCATGGGTTCAAGGACTTACCGAAGGAGAATACTCTGATCTCAGTGTAGAAGAGCGTCTAAACGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTATTATTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCTGAAGCACAAATAGATAAAGTTCGTCTGAAAGATGATTATATTAGTAAATTAGATTTCCCATCACTTGCTGGAAATAAATTTGAAACACAAGACACATATCCTGCTGTGGAGGGAAATCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCATCACCCAGCACTGCAGAAAACCAAAGAGGAGCTCCTTCTGCACAGAGTCTACTTATTGAAAAGCCATTGGTAGCTCATGATTTCTGCCCAGGCACAGGTCCGGACAACTCTCAGAGTCAGATGCATGCACAATATTCAAAAAGGTCACGATCACAGTTAAAATCTTATATTTCCCACATAGCAGAGGAGATGTATGTCTACAGGTCTCTACCCCTTGGCCAAGACCGCAGGCGTAACCGATATTGGCAGTTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGCAGTTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATATTCTTTTGACATCACTGGATTCACGCGGGATCAGGGAGTCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAAAGAAAATGTTCGAAAAAATACACAATGTACAAAAATTGGAAGCAAAGGGGAAGGTTCTATGAAAACTGAAGCTGATGAAACATATCCAGTGCCTGAGCACCTTTCAGGATCTGGCAGTCCTAGCAGTACCCTTCATGAGTTGAACTCTGGTACATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGCAAAAGTGAGAATGAAAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATAAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATTTGTGAAATCTGTCTCGATCCTTATTTTATGGAAGACTCCCATTGCAATTCCTGCCACCAAACATTTCCGTCAAATAATGAATTTAATATTTCTAAACACACATTTCAATGTGTTGGTAATTTATCCAAAGATATTATGGAACATTCTCTTCCTCTGAGGACAAGATTGCTTAAGGTCCTGCTGTCATGTATGGAGGCATCTGTTCTCTCTGAAGCATTCGGAACAATTTGGACAACTGATTTTAGGAAGCATTGGGGTGTGAAGTTGAATAAATCATCAACCGTGGAGGAACTTTTACAGATGTTGACCCTGTTTGAAAAAGCGCTACGGCGTGATTTTTTGTCATCAAACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTATGTCAAAAAGTGCTGCACATGTGTCTGCTGATCCTGAATCAGTTGCTCTACTTCCATGGGTTCCACTAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTTGATTCATCCATCAGCTACGTAAAGCTTGAGAGACTTGAGCCTGTTGAGGAGAAAGAAGCAACAGAATACATTAGGCTTCCATCAAGATATACTCCCTTCAAGCCTAACAGAGAGTTTGAGGCAGCAGCTCTTGATCATAATGGATTCACCAAAGTTAAACCTTCTGCTAATAAAATTGCACGAAGTGGAAACAAACGTGGGCGAGGAGCTAGTGATCTTGGACGGGGTAAAAAGCTGTCTAAAAGAATGTACAATTCCAAACAAGACATTGGCCGTCGAAACATCAAGGTCACCGAGAATCTAAGTCAGAAATTAAAACAGCAGGGACAGGGAACACAAGGACAAGGGGGTGGACGAGGTCGCCGAACGGTCAGAAAGCGTAGGGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGCCATGCAGCAGCCAGTCATAGTTCCAAGGGTGGAAGAGAACCATTGAGAAACTTGGATGAAGAATGGGATCTAGAAAAATTAAGTCCTATGACTCCTGTTCACATTGGGGTTGCTGAGAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGATAATGCTCAAGCAGTGGAATCCGATGATGATGCTCTAGCAGTGGAGTCCGATGATGATGCTCAAGCAGTGGAATATGATCATGGAAATTGGGAGATAGGTTACAACGGTGTCTCCCCTAACAGATGGGATAGGGATTTGGTTGGAATGAGTGATGAAGATGTGGACAATTTTGAAGATGAAGACAATGGTAATGATAATGACATTGGCATTGGCATTGAAGAGAATGAAGAGGAAGATTCCGAGGAAGATGTTATGAGTGAAGGTTCGGATGGAATGCTGAATAGAGTAGTGAATGTAGGGGGCTCCGAAGATGTTATGAGTGAAGATTCTTCTGATTAG 5388 0.4209 MEAEAENNSQKGDDGGENSNENFNNNGSNNKIVSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKELPVKKARKAPPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTELRNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYDPMEGPARTPPFPIGNEHLPRIHGTQSQSSRARLSSQHDKPVTPYTSPPPFLSQQDKQSIPYPSPPRDNDVVPKREPHPNIANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKKRKTDDARVVKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERLDRERRKEEERMMRERQREEERLKREQRREIERREKYMIKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESTELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRQDPADAESILSEARKKIQIFENGFLAGEDAVDVEREEESESDEVDEDPEDDDLVNPSSGNQNSVQYDNMDISLVNVKENLANDVDLIQNKLDTDLPCFPENGSKDADCPTSVTRQPVACENLNARNLDDNMEIDESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASPSTAENQRGAPSAQSLLIEKPLVAHDFCPGTGPDNSQSQMHAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEAFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQCTKIGSKGEGSMKTEADETYPVPEHLSGSGSPSSTLHELNSGTSETSSSFKIELGKSENEKKAALRRYQDFQKWMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNNEFNISKHTFQCVGNLSKDIMEHSLPLRTRLLKVLLSCMEASVLSEAFGTIWTTDFRKHWGVKLNKSSTVEELLQMLTLFEKALRRDFLSSNFSTTDELLGLSSMSKSAAHVSADPESVALLPWVPLTTAALSLRLFEFDSSISYVKLERLEPVEEKEATEYIRLPSRYTPFKPNREFEAAALDHNGFTKVKPSANKIARSGNKRGRGASDLGRGKKLSKRMYNSKQDIGRRNIKVTENLSQKLKQQGQGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSKGGREPLRNLDEEWDLEKLSPMTPVHIGVAENSNSAEEVESDDNAQAVESDDDALAVESDDDAQAVEYDHGNWEIGYNGVSPNRWDRDLVGMSDEDVDNFEDEDNGNDNDIGIGIEENEEEDSEEDVMSEGSDGMLNRVVNVGGSEDVMSEDSSD* 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0415 1795 Gene3D - 40 98 - -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 853 889 - -
Mtr2g0415 1795 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 1795 IPR044977 GO:0006357
Mtr2g0415 1795 CDD homeodomain 43 98 IPR001356 GO:0003677
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1735 1769 - -
Mtr2g0415 1795 SMART testlast3 570 629 IPR018501 -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1229 1280 - -
Mtr2g0415 1795 SMART HOX_1 40 102 IPR001356 GO:0003677
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1735 1795 - -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1587 1609 - -
Mtr2g0415 1795 Pfam DDT domain 571 626 IPR018501 -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1253 1280 - -
Mtr2g0415 1795 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 960 1004 IPR028942 -
Mtr2g0415 1795 ProSiteProfiles HARE-type HTH domain profile. 752 821 IPR007759 GO:0006355
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 854 876 - -
Mtr2g0415 1795 Pfam HB1, ASXL, restriction endonuclease HTH domain 752 820 IPR007759 GO:0006355
Mtr2g0415 1795 Coils Coil 466 522 - -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 264 348 - -
Mtr2g0415 1795 SUPERFAMILY Homeodomain-like 28 97 IPR009057 -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1560 1586 - -
Mtr2g0415 1795 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Mtr2g0415 1795 Coils Coil 395 460 - -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 12 46 - -
Mtr2g0415 1795 PANTHER HOMEOBOX DOMAIN PROTEIN 4 1795 - -
Mtr2g0415 1795 ProSiteProfiles DDT domain profile. 570 629 IPR018501 -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1551 1648 - -
Mtr2g0415 1795 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 283 304 - -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 426 448 - -
Mtr2g0415 1795 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1142 1214 IPR028941 -
Mtr2g0415 1795 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0415 Mtr-Chr2 4167048 4175918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0415 34 1718 Homeobox Transcription Factor Family AT1G28420 47.668 0.0 1298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mtr2g0415 WSD 5.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0415 - - gmx:100777465 2494.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0415 2 4167048 4175918 Mtr2g0415 2 4167048 4175918 ECH
Mtr4g2922 4 42926603 42936930 Mtr2g0415 2 4167048 4175918 PCT