Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0414 ATGGGTTTGGACTACTATGAGATTTTGGAGGTTGACAAGAATGCCACAGACGATGAATTGAAGAAAGCATATAGAAAACTTGCCATGAAATGGCACCCTGACAAGAATCCTGACAATAAGAATGATGCTGAGACTAAATTCAAACTCATATCTGAAGCATATGAGGTTCTAAGTGATCCGCAAAAGAGAGCAATTTATGATCAGTATGGAGAAAGCAACCTTAAAAATGGAATGCCTACAGCAGGTGACAATGCAGCTCCATACTTCCAAACTCATGATGGCAGAAGGTTTAGGTTCAATCCCAGAAGTGCAGATGGCATATTTGCAGAAGTTTTTGGCTTTTCAAGCCCTTATGGAGGAATGGGAATGAGGGGTGGCGGCTGCAGAGGCATGGGCATGAGGGGTCAGTCGTGGGTGTCCAGGTCTTTTGGCGATATTTTTGGCAAAGATGTATTTGGAGAAAGCAGACAAACGAGTCAAGCTCCGAGACGCAAGGCACCTCCCATTGAAAATAAATTGCCTTGCAGCCTTGAGGAACTTTATAAAGGCACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCATACGCAAGCGGCAAAACTGTACCTGTGGAGGAAATACTAACAATTGAAATCCAACCAGGCTGGAAAAAGGGAACAAAAATCACTTTCCCGGAGAAAGGAAATGAGCAACCAAATGTCATCGCTGCAGATATTGTATTTGTTATTGACGAGAAACCTCACAATGTATTTACAAGACAAGGTAATGATTTGGTTATGACACAAAAGATATTACTTGCAGAAGGAGAAGCTCTAAGCAGAAGCTACACCTTCCAACTTACTACTTTGGATGGACGAGGTCTGACCATTGCCATAGACAATGGAATTGATCCAACCTATGAAGAAGTGATTGCCGGTGAAGGGATGCCAATTTCCAAGAATCCTTCACAGAGGGGTAATCTTAGGATCAAATTCGACATCACATTCCCTAGCATGGTAGATGCTGAAACAGAAAGCCAGAACTAA 1026 0.423 MGLDYYEILEVDKNATDDELKKAYRKLAMKWHPDKNPDNKNDAETKFKLISEAYEVLSDPQKRAIYDQYGESNLKNGMPTAGDNAAPYFQTHDGRRFRFNPRSADGIFAEVFGFSSPYGGMGMRGGGCRGMGMRGQSWVSRSFGDIFGKDVFGESRQTSQAPRRKAPPIENKLPCSLEELYKGTTKKMKISREIAYASGKTVPVEEILTIEIQPGWKKGTKITFPEKGNEQPNVIAADIVFVIDEKPHNVFTRQGNDLVMTQKILLAEGEALSRSYTFQLTTLDGRGLTIAIDNGIDPTYEEVIAGEGMPISKNPSQRGNLRIKFDITFPSMVDAETESQN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0414 341 CDD DnaJ_C 167 331 - -
Mtr2g0414 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 250 336 IPR008971 GO:0006457|GO:0051082
Mtr2g0414 341 CDD DnaJ 4 59 IPR001623 -
Mtr2g0414 341 Gene3D - 168 246 - -
Mtr2g0414 341 Pfam DnaJ C terminal domain 169 330 IPR002939 -
Mtr2g0414 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mtr2g0414 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 259 IPR008971 GO:0006457|GO:0051082
Mtr2g0414 341 Gene3D - 248 331 - -
Mtr2g0414 341 Pfam DnaJ domain 4 67 IPR001623 -
Mtr2g0414 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mtr2g0414 341 Gene3D DnaJ domain 3 123 IPR036869 -
Mtr2g0414 341 SMART dnaj_3 3 62 IPR001623 -
Mtr2g0414 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mtr2g0414 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mtr2g0414 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mtr2g0414 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mtr2g0414 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Mtr2g0414 341 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 337 - -
Mtr2g0414 341 SUPERFAMILY Chaperone J-domain 4 73 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0414 Mtr-Chr2 4164272 4166739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0414 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 5.67e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0414 K09510 - gmx:100794650 466.848