Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0400 ATGCCAAATTCAGATTCTTCGGTAGAAGATGATCCATCACTTCAAGAAGAAGAAGAAGATGAAGTTGATGATGACGAAGAAGAAGAATTTGAAGAAGTAGAAGTAGAAGAGGAAGAAGAGGATCAGGAAGAAGAAGAGGAAATAGAAGAAGTTGAACAAGAAGAAGAGGAGCAGGAAGAAGTTGAAGAAGAAGAGGAGGAGGAAGAAATTGAAGAGGAAGAGGAGGATGAAGTGGAAGAAGAAGAAGAAGAAGTTGAGAAGGAGGAAGTAGAAACAGTAGTGGTGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAAGCAATAGAGAGTGAACATATCAAAGAAACAATAAAGGTGGAAGAGGAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAGATGGAGGATGAGGAAAAACAAGAAAAAATAGTAGTAGAGGAGAAAGATAAAGACAAAGATGAGGTTCCAAATTCTCTTCCTGATGCGGATAAACATAGCAAAGTAGAGGTGGAAGAGGAGGAGGAGAAAGAAGAAAACGAAGAAGCAATAGACATGGAAGTAGAGGAAGAGCAAGAAACAGTTGTAGAGAAAGATAAAGAGAAAGATGAGGTTCCAGATTCTCTGCCCGATGCAGATAAACGTAGCAAAGATTCAAGCCAACATATGGAACTTGATGTGAAAGAGGAGAACTTGGGGTCAGTTTCTCATGTGCCCGATAACCCTGAAGTAATACGGCCATCACATTATATGGAAGAGAATGATGCCATGAGTAAAGCATCTGTTTCGTTGCATGAGGAATTGACATTGAAAAATGAAGATTATCCCCTGAAACAAAAAGTAGAAAGTCCTCCAAAACCAAGTGAAAACTTGATTTCTGCCGAAGATGGGAAAAATCAAGGTCTAAACGTTGATGTTGAAAATCCTGGACATCTTCAGAGGAAAGCCTCTGAAGGATGCAGTGAACCAGATTGCAATAGCAAAGCTTCTTTATCTGATGTTATGGACATTGATTCTAGGGCCACCAAGCCATCTAGTGATACGGGAAAAGATGTGGTTACTGGAATCATACTGAGAGATAATTTTGTCGAGGATGCTGATGGTGATCAGAACTCTAAGGAGAAAGTTATGCAGTCAGAGATGGAGTCAACGGTTGATGTGAAACAAAAGCCATCAAGGACTAGAATCCACTCTCCCAGTGCTGAGATTAAAGATGGAAACAAAAGACCTGCAATTATATGTGCTTTTTTTGCTAAAGGTTGGTGCATCCGAGGTAGTTCTTGTAGCTTCCTTCATGTAAAAGATAGCGTGAATAATACCGACCAGGGGGCTGAAGGAGACGTAGTCACTGCACATCAGAAGAGAGAATTGAAATTGGAAAAAGGTGTTAAGGAAAATGAGGAAGAAGCAAGTCCAAGTTGGCATCCATCTCATGAAAAAGAGAAGTTTCTGATGAGGGACAGCTTGTTTCCAGAGAATAAATCTGCATTTAATACATCAAACAATTATTTCAGCTCAAATCTTTCCTCATATTCATCCCGTGCAGAGGAAATGATTGCTATTCGAAACCAACATATGTACAGAGGATATACATCGACAAAAGATTTTAGTTCACCTTTAGGTGCAAGTGCTTTGGACTCTCACGCCCATAAATCCTCTTTCTCTTCAGATCGGGAAGATTTTCATCTAGTTGGTTCATCTAGGGTTGCACCACATGCTAATGGATATACACTGAAAACCCGTTCTAATTGGGAACCTTCTGTTCCATTTCGACCATCCTTTTTTATCACTTCTATGAATGTATCATCCCCCAGAGATCTTTATGACCCTCTTCGTAATAGCATTGAGATACCAAATATTGGAGATGGGTCTCTGAAAGCTTCCCTTCTAATTCGAGGGTCATCTGTTCAGGCTTCATCACAAGTTCGGACATATGATGATTCTGCTGCAGTTGGGAAACAAATGTCTGATGTTAATGATGATAAAAGTTCTGTATCTTCCCATCATAAGTTTTATGAAAATGAGCCAAACAGAAGTTCTGTTCCTCGTGGAAAAGATTGTCTTGCAACCAAAGCAGAGATAACATCAGGAACTTGTGCAAACTACCAAAATGGTGACATAGGTGTGGGACAATATGCCTTTGGTGTTGAAGATAGGATAGAAACACTGAAAAAACGAACTGAGCATGATGCTAGGCATCATAGTGATGAATCAGAGCACAAAAAAAATAGAGTAGCAAAGGATAATAAATTTCATGAAATGGAGGTTGACTTTCAGACAGATGGCAGTGTACTCAAAGAAACAAAGACACTGAAAATTTTCCATGCAGTCCTTGTCGATCTTGTGAAAGAGTTGCTAAAACCATTTTGGCATGAGGGTCGTCTCAGCAAGGATGCACATATATTGATAGTTAAAAAATCAGTTGACAAGGTTATTAGCACTTTAGAACCACGCCAAATTCCGACCACTGAAGATACTGCTAAGCAATATGTTTCTTTATGTCGGCCAAAAATTGCAAAGTTAGTCCATGGATATGTCAATAAACATGGCAAATCTTGA 2676 0.401 MPNSDSSVEDDPSLQEEEEDEVDDDEEEEFEEVEVEEEEEDQEEEEEIEEVEQEEEEQEEVEEEEEEEEIEEEEEDEVEEEEEEVEKEEVETVVVEEEEEEEEEEEEEEEEEEEEEEEEAIESEHIKETIKVEEEEKEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEMEDEEKQEKIVVEEKDKDKDEVPNSLPDADKHSKVEVEEEEEKEENEEAIDMEVEEEQETVVEKDKEKDEVPDSLPDADKRSKDSSQHMELDVKEENLGSVSHVPDNPEVIRPSHYMEENDAMSKASVSLHEELTLKNEDYPLKQKVESPPKPSENLISAEDGKNQGLNVDVENPGHLQRKASEGCSEPDCNSKASLSDVMDIDSRATKPSSDTGKDVVTGIILRDNFVEDADGDQNSKEKVMQSEMESTVDVKQKPSRTRIHSPSAEIKDGNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGAEGDVVTAHQKRELKLEKGVKENEEEASPSWHPSHEKEKFLMRDSLFPENKSAFNTSNNYFSSNLSSYSSRAEEMIAIRNQHMYRGYTSTKDFSSPLGASALDSHAHKSSFSSDREDFHLVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYDPLRNSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHHKFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEHDARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPFWHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHGYVNKHGKS* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0400 891 MobiDBLite consensus disorder prediction 181 212 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 232 272 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 695 723 - -
Mtr2g0400 891 Coils Coil 23 187 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 310 346 - -
Mtr2g0400 891 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 211 891 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 213 231 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 1 284 - -
Mtr2g0400 891 Coils Coil 208 233 - -
Mtr2g0400 891 SUPERFAMILY CCCH zinc finger 447 471 IPR036855 GO:0046872
Mtr2g0400 891 MobiDBLite consensus disorder prediction 10 122 - -
Mtr2g0400 891 Pfam Torus domain 420 472 IPR032297 -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 134 180 - -
Mtr2g0400 891 ProSiteProfiles Zinc finger C3H1-type profile. 447 474 IPR000571 GO:0046872
Mtr2g0400 891 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 211 891 - -
Mtr2g0400 891 MobiDBLite consensus disorder prediction 701 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0400 Mtr-Chr2 4017468 4024769 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr2g0400 Torus 1.4e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0400 - - cam:101503101 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0400 2 4017468 4024769 Mtr2g0400 2 4017468 4024769 ECH