Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0384 ATGGAGAACAACCCTAGTTCATCCAGAGTTGACAGAAAATTCGTTGAAAGGAATAGAAGAAATCAAATGAAAGCTCTCTGCCAGAAGCTCAACTCACTTCTGCCTCATCAAACTTCTAAGGAGGCGATTTCAGTGCCGGATCAGCTAAAGGAAGCAACAAACTACATAAAGAAATTGCAGATCAACCTGGAGAAAATGAAGGAAAAGAAGAATTTTCTACTAGGAATTCAAAGGCCAAATGTGAATTTGAATAGAAACCAGAAGATGGGATTAAAGTCTCCAAAAATTAAGATACAACAAATTGGTTTAGTCTTAGAGGTTGTTCTAATAACTGGATTGGAGTCTCAGTTTTTGTTCAGCGAAACCTTTCGAGTTCTTCATGAAGAAGGAGTTGATATTGTTAATGCTAGTTATAAGGTCAATGAAGATTCTGTTTTCCATTCAATACACTGCCAGGTAGGAGAATTTGGCAATGAAGCTGCAAGAATATCTGAGAGATTGAAGAAGTTTATGCAAGACTATTAG 525 0.3676 MENNPSSSRVDRKFVERNRRNQMKALCQKLNSLLPHQTSKEAISVPDQLKEATNYIKKLQINLEKMKEKKNFLLGIQRPNVNLNRNQKMGLKSPKIKIQQIGLVLEVVLITGLESQFLFSETFRVLHEEGVDIVNASYKVNEDSVFHSIHCQVGEFGNEAARISERLKKFMQDY* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0384 174 Gene3D - 1 90 IPR036638 GO:0046983
Mtr2g0384 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Mtr2g0384 174 Pfam Helix-loop-helix DNA-binding domain 10 60 IPR011598 GO:0046983
Mtr2g0384 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Mtr2g0384 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 172 IPR015660 GO:0003700|GO:0006357
Mtr2g0384 174 Coils Coil 49 76 - -
Mtr2g0384 174 PANTHER TRANSCRIPTION FACTOR BHLH162 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0384 Mtr-Chr2 3844966 3846912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0384 3 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 44.444 1.44e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g0384 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0384 - - gmx:100784418 259.225