Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0355 ATGAGGTGTGGCTGCTTTGGAGCATCTAGAACTAGAAAGAAGGAAAGGAAACCTTCTGATTATATTTCTGGTGAAATTGAAGGTTATCCTTTAGATAATATTAGGCATTTTTCTGATAAAGAATTGAGCTTGGCAACTGATAATTATCATTTAGGCAATAAGATAGGAAGGGGAGGCTTTGGAACTGTTTACCAGGGAACATTAAAAGATGGAAGAAAGATAGCAGTGAAGCCTCTTTCTGTTGGATCAAAGCAGGGAGTTCGTGAATTTTTGACTGAAATTAAAACCTTATCAAATGTTAAACATTCAAACCTTGTTGAATTGGTTGGATTCTGCATTCAAGGACCTAATCGTACAGTAGTCTATGAGTATGTTGAAAATGGCAACCTTCATACTGCATTACTTGGAAAAAAGAGTTTAAGCGTCAAGATGAAGTGGAGAGAAAGATCAACTATTTGCATCGGTACCGCGAAGGGTCTTGCATATCTTCATGAAGAGCTTACACAACATATTGTACATAGAGACATCAAAGCTAGCAATGTACTACTTGACAAAGACTTTAATCCCAAAATAGGTGATTTTGGGATGGCCAAATTATTTCCAGATGATATCACTCACATCAGCACAAGAATTGCCGGAACAACTGGTTATTTGGCACCAGAATATGCATTAGGTGGACAGTTAACCAAGAAGGCTGATGTATACAGTTTTGGAGTTCTTATACTTGAAATAATAAGTGGTAAAAGCAGCTCAAGGACAAACTGGGATGGATCACATAAATCCCTTCTAGAATGGGCATGGCAACTTCATGAAGAGGAGAAATGGTTGGCGCTAGTAGATCCGGAGATGGAAGAATTTCCTGAGAAAGAGGTAATCAAGTACATTAAGGTTGCCCTTTTCTGCACACAAGCTGCAGCAAGAAGAAGACCGTTGATGACTCAGGTTGTGGATATGCTCTCAAAGGAAATTCAGCTCAACGATAAACAACTAACAGCACCAGGATTGTTCAATTATGATGCAGGAGAAACTTCTCAAAAGAAATCAAATCCTGAATCTTTAGTTTATCACACTAGTTCTACTCAGCCTAGTATTACCGAGGTTACAGCTAGGTGA 1113 0.3854 MRCGCFGASRTRKKERKPSDYISGEIEGYPLDNIRHFSDKELSLATDNYHLGNKIGRGGFGTVYQGTLKDGRKIAVKPLSVGSKQGVREFLTEIKTLSNVKHSNLVELVGFCIQGPNRTVVYEYVENGNLHTALLGKKSLSVKMKWRERSTICIGTAKGLAYLHEELTQHIVHRDIKASNVLLDKDFNPKIGDFGMAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTKKADVYSFGVLILEIISGKSSSRTNWDGSHKSLLEWAWQLHEEEKWLALVDPEMEEFPEKEVIKYIKVALFCTQAAARRRPLMTQVVDMLSKEIQLNDKQLTAPGLFNYDAGETSQKKSNPESLVYHTSSTQPSITEVTAR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0355 370 Pfam Protein tyrosine and serine/threonine kinase 50 319 IPR001245 GO:0004672|GO:0006468
Mtr2g0355 370 SMART serkin_6 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0355 370 CDD STKc_IRAK 55 321 - -
Mtr2g0355 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Mtr2g0355 370 PANTHER - 1 362 - -
Mtr2g0355 370 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 362 - -
Mtr2g0355 370 Gene3D Phosphorylase Kinase; domain 1 23 124 - -
Mtr2g0355 370 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Mtr2g0355 370 PIRSF TyrPK_CSF1-R 283 368 - -
Mtr2g0355 370 PIRSF TyrPK_CSF1-R 151 251 - -
Mtr2g0355 370 PIRSF TyrPK_CSF1-R 37 152 - -
Mtr2g0355 370 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Mtr2g0355 370 MobiDBLite consensus disorder prediction 341 370 - -
Mtr2g0355 370 ProSiteProfiles Protein kinase domain profile. 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0355 370 Gene3D Transferase(Phosphotransferase) domain 1 125 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0355 Mtr-Chr2 3525654 3528371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0355 13 334 Receptor kinase-like Gene Family AT1G56120 49.693 5.90e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g0355 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0355 - - mtr:MTR_2g013210 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2987 4 43524339 43530837 Mtr2g0355 2 3525654 3528371 PCT