Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0336 ATGGATCATAACATGCCATGTTTCTACACATTGGCTTTGATAGTATTGTTTTTATGTATGAATACTATTGTTTCTTCTAGAGATAAGAAATTGCTTGGTGGAAGAAATTTGAGCATTGGTGATAAGGGTGATCTTGTGACTAACTTACCAGGCCAGCCTCAAGCAGATTTCAAACACTATGCTGGTTATGTCATTGTCAATGAAACCAATGGAAGATCACTCTTTTATTGGTTTTTTGAGGCCGTGACAAAACCTGAGGAGAAACCATTGCTTTTATGGCTTAATGGAGGTCCTGGATGCTCATCTGTTGGATATGGAGCAACACAAGAGATTGGCCCATTTTTAGTGGACACTGATGGCAAAGGACTTAAATTTAATAACTTCTCATGGAATAGAGAAGCCAACCTGTTATTCCTTGAATCTCCTGTTGGAGTTGGATTTTCCTACTCAAATACAACCAGTGAATACAAACAATTGGGAGATGATTTCACAGCTAATGATACTTACACTTTCCTACATAAGTGGTTCCTCAAGTTTCCTTCATATAGAACAAGGGCATTGTACATAGGAGGAGAGAGCTATGGAGGACATTTTGTACCACAATTGGCTGAAGTTATCCTTGATAGGAATAAAGACCCTTCCCTACATATTGATCTCAAGGGAATTTTGGTGGGAAACCCTGAAACTTCTTATGCTGAGGATTGGTGGGGTATGATTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTCACAAATTACTTAAAACAAATTGTGAATTTAAAAGCAGTGAAGATATATTGAGTAAGGATGATGTATGTAATAAAGGATTAGATGAAATGTTCAAGCAGTACAATGAAATTGATATCTACAGTCTCTACACCCCTACTTGCTTAGCCAACAAGGGGATTTCAAAACCAATGCAAAAGGTTATGAAGCGTTCATCAAACAAAGACATGATACCAAAGGTAATGGGTGGTTATGATCCATGTCTAGATGACTATGCTAAAATATTTTATAACAGACCAGATGTTCAGAAGGCTCTCCATGCCAGTGATGGTCACAATCTCAAGAATTGGAGTATTTGCAATGATGACATATTTCACGACTGGGCACAATCAAAGCGTTCTATTATTCCAATTTACAAGAAGCTTATTCCAACAGGACTTAGAATTTGGCTTTACAGTGGAGACACAGATGGTAGAGTGCCAGTATTGTCAACAAGATACAGCATAAATCTTCTTGGTTTGCCAATCACCAAGCCATGGAGTCCATGGTACAATGAAAAGCAGGTTAGTGGGTGGTATCAAGAATATAAAGGGCTTACATTTGCTACATTTCGAGGAGCTGGCCATGATGTGCCTACTTTTAAACCAAGCAATTCACTTGTATTTTTTTCCTCATTTCTTGCGGGACAATCACTACCTTCTATAAGATGA 1443 0.3812 MDHNMPCFYTLALIVLFLCMNTIVSSRDKKLLGGRNLSIGDKGDLVTNLPGQPQADFKHYAGYVIVNETNGRSLFYWFFEAVTKPEEKPLLLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNREANLLFLESPVGVGFSYSNTTSEYKQLGDDFTANDTYTFLHKWFLKFPSYRTRALYIGGESYGGHFVPQLAEVILDRNKDPSLHIDLKGILVGNPETSYAEDWWGMIDYAWSHAVISDETHKLLKTNCEFKSSEDILSKDDVCNKGLDEMFKQYNEIDIYSLYTPTCLANKGISKPMQKVMKRSSNKDMIPKVMGGYDPCLDDYAKIFYNRPDVQKALHASDGHNLKNWSICNDDIFHDWAQSKRSIIPIYKKLIPTGLRIWLYSGDTDGRVPVLSTRYSINLLGLPITKPWSPWYNEKQVSGWYQEYKGLTFATFRGAGHDVPTFKPSNSLVFFSSFLAGQSLPSIR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0336 480 Gene3D - 332 368 - -
Mtr2g0336 480 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Mtr2g0336 480 Gene3D alpha/beta hydrolase 41 301 IPR029058 -
Mtr2g0336 480 Pfam Serine carboxypeptidase 50 472 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 476 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 Gene3D - 379 473 - -
Mtr2g0336 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Mtr2g0336 480 PANTHER CARBOXYPEPTIDASE 10 476 - -
Mtr2g0336 480 SUPERFAMILY alpha/beta-Hydrolases 42 476 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0336 Mtr-Chr2 3344160 3348823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0336 337 476 Calmodulin-binding Proteins AT2G22960 34.752 1.64e-17 79.0