Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0330 ATGGCTATGCCTCGATCATCTTTCTTTTCCTTCTCTTATGGATTCACCTATGACGTATTCTTGAGTTTTAGGGGCACTGACACTCGCTATGGTTTTACTGGAAATCTCTATAGAGCTTTAAGTGACGGTGGATTCTGCACCTTCATTGATGATAGGGAGCTTCATGGAGGTGATGAAATCACACAATCACTTGTCAAGGCCATCGAAGAGTCCATGATTTTTATTCCGGTCTTCTCTATCAACTATGCTTCTTCTATATTTTGTTTGGACGAACTTGTCCACATCATTCATTGCTTCGACCAAGAGAAGGGTCGCAAAATTTTACCTATTTTCTATGATGTGGAACCTTCCCACGTGCGACATCAGACTGGGAGTTATGGCAAAGCCATAGCTAGGCATGAGAAGAGGTTCCAAAATAACAAAGAAAAATACAACTACAACATGAAGAGGTTGCATAAATGGAAGATGGCTCTTAACCAAGCAGCTAACTTGTCCGGCCACCATTTTAATCCTAGGAATGAATATCAATACAAGTTTATAGGGGATATAGTCAAAAATGTATCCAACAAGATAAATCGTGCTCCTTTACATGTTGTCGATTACCCGGTTGGCATGCAGTCTCGAGTCCTTAAAGTAAATTCACTTCTAGAAGTTGCATCTAATTATGAAGTCAAGATGATAGGTATCTATGGACTTGGAGGAATGGGTAAGACAACTCTTGCAAGAGCAGTTTATAATTTCATTGCTAATCAATTTGAATGTGTATGTTTTCTTCACAATGTGAGAGAAAATTCAGCAAAACATGGTCTAGAGCATCTCCAAAAGGATTTTCTTTCCAAAACTGTTGGATTGGACATTAAGTTAGGAGATAGTAGTGAGGGAATTCCAATCATAAAGCAAAGGCTACACCGGAAAAAGGTTCTATTGGTTCTTGATGACGTTAACGAATTGAAGCAGGTGCAAGTCTTAGCTGGAGGGCTTGATTGGTTTAGTGTTGGTAGTAGGGTGATCATTACCACTCGAGACAAACACTTGTTATCAAGTCATGGGATTGAACTAACATATGAAATAGATGAGTTAAATAAGGAAGAAGCACTTGAATTGCTTACATGGAAGGCTTTTAAAAGTAAGCAAGTTAATTCAAGTTATGAGCACGTTCTAAACCGCGCAGTAAATTATGCTTCTGGCCTTCCATTGGCATTAGAAGTATTAGGTTCCAACTTGTTTGGAAAGAATATAAAAGAGTGGAATTCTTTGTTGGATCGATATGAAAGGATTCCTAATAAAGAGATTCAGAAGATACTTAAAGTGAGTTTTGATGCTTTGGAGGAAGACGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATAACCTAAAACAGATGGAAGATATGCTTTCTGATCATTACGGTCAATGCATGAAATATCATATTGGAGTTTTGGTTAAAAAAACTCTATTAAGGATTTGTCGGTGGAATTACAGTGTCACAATGCATGACTTGATAGAAGACATGGGTAAAGAAATTGTAAGACAGGAATCAGTAAGAGAGCCTGGAAAACGTAGCAGGTTGTGGTTCCATGAAGATATATTTCAGGCCATTGAAGAAAATTCAGGAACAAGTCAAATTGAAATCATACATTTGGATTTTCCACTACCTCAAGCAATTGTAGAGTGGAAAGGAGATGAATTCAAGAAGATGAAAAACCTCAAAACACTTATTGTTAAAACTAGTTCCTTTTCCAAACCTCTTGTACATCTTCCTAATAGTTTAAAAGTACTGGAATGGCATGGTTTAAAGGATATACCATCTGATTTTCTTCCAAACAATCTTTCCATATGCAAGTTACCCAACAGTAGCCTTACATCATTTAAGTTGGCTAACTCTTTGAAGGAAAGGGTAATGATTTCATTTTCCTCGTCGTGTATACAAATATATTACCTTCTGACTATTCACTTTTTCCGTTTTGGTTTATCTTTTTTGCAGATGTTCTTGGGTATGAAAGTTTTACATTTAGACAAGTGTTACAGGTTAACAGAAATAAGTGATGTATCTAGTCTCCAAAATTTAGAAGAATTTTCATTTAGATGGTGTAGGAATTTACTCACAATTCATGATTCTGTTGGGTGCCTGAAAAAACTTAAAATCTTGAAAGCTGAAGGTTGTAGTAATCTCAAGAGTTTTCCACCAATTCAATTGACATCTCTTGAACTACTTGAACTTTCATATTGTTATAGGCTTAAGAAATTTCCAGAAATATTAGTAAAGATGGAAAACATAGTAGGAATTGATTTGGAAGAAACTTCCATAGATGAATTGCCAGATTCATTTCAAAATCTCATTGGGATTCAATACTTAATACTAGATGGACATGGAATTTTTCTTAGGTTTCCATGTAGCACTCTCATGATGCCAAAACAAAGTGATAAACCAAGTTCCATGTTGTCCTCAAATGTACAAGTTATTGTGCTAACAAATTGTAACCTAACAGATGAATCTCTTCCAATAGTTCTGAGGTGGTTTACTAATGTGACATATTTACACTTATCAAAGAATAATTTCACAATTCTTCCAGAATGCATCGAAGAACATGGCTCTTTAAGAATCCTCAATCTTGTTTGCATTAAATTGTGA 2643 0.3591 MAMPRSSFFSFSYGFTYDVFLSFRGTDTRYGFTGNLYRALSDGGFCTFIDDRELHGGDEITQSLVKAIEESMIFIPVFSINYASSIFCLDELVHIIHCFDQEKGRKILPIFYDVEPSHVRHQTGSYGKAIARHEKRFQNNKEKYNYNMKRLHKWKMALNQAANLSGHHFNPRNEYQYKFIGDIVKNVSNKINRAPLHVVDYPVGMQSRVLKVNSLLEVASNYEVKMIGIYGLGGMGKTTLARAVYNFIANQFECVCFLHNVRENSAKHGLEHLQKDFLSKTVGLDIKLGDSSEGIPIIKQRLHRKKVLLVLDDVNELKQVQVLAGGLDWFSVGSRVIITTRDKHLLSSHGIELTYEIDELNKEEALELLTWKAFKSKQVNSSYEHVLNRAVNYASGLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQKILKVSFDALEEDEQSVFLDIACCFKGYNLKQMEDMLSDHYGQCMKYHIGVLVKKTLLRICRWNYSVTMHDLIEDMGKEIVRQESVREPGKRSRLWFHEDIFQAIEENSGTSQIEIIHLDFPLPQAIVEWKGDEFKKMKNLKTLIVKTSSFSKPLVHLPNSLKVLEWHGLKDIPSDFLPNNLSICKLPNSSLTSFKLANSLKERVMISFSSSCIQIYYLLTIHFFRFGLSFLQMFLGMKVLHLDKCYRLTEISDVSSLQNLEEFSFRWCRNLLTIHDSVGCLKKLKILKAEGCSNLKSFPPIQLTSLELLELSYCYRLKKFPEILVKMENIVGIDLEETSIDELPDSFQNLIGIQYLILDGHGIFLRFPCSTLMMPKQSDKPSSMLSSNVQVIVLTNCNLTDESLPIVLRWFTNVTYLHLSKNNFTILPECIEEHGSLRILNLVCIKL* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0330 880 SMART AAA_5 223 363 IPR003593 -
Mtr2g0330 880 ProSiteProfiles TIR domain profile. 15 191 IPR000157 GO:0007165
Mtr2g0330 880 SMART till_3 16 164 IPR000157 GO:0007165
Mtr2g0330 880 Gene3D - 190 352 IPR027417 -
Mtr2g0330 880 SUPERFAMILY L domain-like 558 877 - -
Mtr2g0330 880 Gene3D Ribonuclease Inhibitor 549 759 IPR032675 -
Mtr2g0330 880 Gene3D Ribonuclease Inhibitor 760 880 IPR032675 -
Mtr2g0330 880 PANTHER ARCHAEAL ATPASE 27 877 - -
Mtr2g0330 880 SUPERFAMILY "Winged helix" DNA-binding domain 429 537 IPR036390 -
Mtr2g0330 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 453 IPR027417 -
Mtr2g0330 880 Pfam TIR domain 17 193 IPR000157 GO:0007165
Mtr2g0330 880 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 877 IPR044974 GO:0006952
Mtr2g0330 880 Gene3D - 359 443 IPR042197 -
Mtr2g0330 880 PRINTS Disease resistance protein signature 226 241 - -
Mtr2g0330 880 PRINTS Disease resistance protein signature 301 315 - -
Mtr2g0330 880 PRINTS Disease resistance protein signature 394 408 - -
Mtr2g0330 880 PRINTS Disease resistance protein signature 734 750 - -
Mtr2g0330 880 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 166 IPR035897 -
Mtr2g0330 880 Gene3D - 16 189 IPR035897 -
Mtr2g0330 880 Pfam NB-ARC domain 213 440 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0330 Mtr-Chr2 3285629 3289040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0330 11 864 WRKY Transcription Factor Family AT4G12020 28.506 8.60e-70 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0330 - - vra:106769791 967.222