Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0328 ATGAATGAGATTGGAGTTGAAGACAATGGTACTGATTTAGAGAATGTTCAAAATGTCGATGTTCATTATTGGAAGTATAATGTTACTACTTCTATTTTGGATGGAAACAATGTTTTGCATTTTCCTCGACGTGTAGCTGAGAATGGTTTGTATATCAATCAATCTAAAATTCTCCTTTTTGATGAAGAAACCGATAAATCTTATGACTGTGATGTTCACACTACGTCAAAAAGCATGCATCAGAAATACATAGGGAGAGGATGGTACGACTTTGTTCTTGAAAAGGGCCTAAAAGTTGGTGACGTTATTTTGTTGACAGTCAATAATCCTCCTAATAGGATGTATGCTGCCGTCGTTAACTGGGAGTGA 369 0.3604 MNEIGVEDNGTDLENVQNVDVHYWKYNVTTSILDGNNVLHFPRRVAENGLYINQSKILLFDEETDKSYDCDVHTTSKSMHQKYIGRGWYDFVLEKGLKVGDVILLTVNNPPNRMYAAVVNWE* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0328 122 SUPERFAMILY DNA-binding pseudobarrel domain 21 110 IPR015300 -
Mtr2g0328 122 ProSiteProfiles B3 DNA-binding domain profile. 24 122 IPR003340 GO:0003677
Mtr2g0328 122 Gene3D - 11 119 IPR015300 -
Mtr2g0328 122 Pfam B3 DNA binding domain 33 108 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0328 Mtr-Chr2 3252478 3253999 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr2g0328 B3 2.8e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0328 - K09287 mtr:MTR_2g012700 258.84