Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0311 ATGATATGGTCTACAAATTCATCAGGATCAATTCAAGAGCCACTTGCAAAAATGTTAGATTCTGGAAACTTGGTCTTGAAGGATGGAGAGATTAACATGATTCTTCTAATTGCACATGAGTTTCCAGAGTTGGTGATTCGCCAAGGGATTTGGAATGGCGTCGCTTTTAATTCCGATGATTGGACATCTTTTACAGGAATGGCCCTTAGGCCACAACTTTCAGTAACCAAGAATGAGGTAGTGAATTGGGATGAACCTGGAGATAGATTGTCAAGGGCCTCATGGCTGCTTGATTTGGTTGGGAACTTGGTTGACATTAGGTTGTTTATAAGTGAAAATAGTTTACAACTTGATCTTTATGTAAGGTTAGCTGCCTCAGAAATAGGACATAGAAACAAGAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATACCATTTTAGCTGCTACAGACAGTTTTTCTATTGAGAACAAGATTGGTCAAGGGGGTTTTGGTCCAGTATACAAGGGTATATTGGCTCAAGGGAAAGAAATAGGTGTGAAAAGGCTATCAAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTAGCCAAGCTACAACGCCGCAATCTTCGAATTGAATCCCAAGATTCTGATTTTGGTGTGTCACATATCTTGGAAGGAGATAGTTCAGCTGTAACAACGAATAAAATTGTCGGAACAATTGGTTATATGTCTCCTGAATATGCGGTAAACGGACTACTGTCCCTCAAGTCAGATGTATTTAGTTTTGGAGTTATAGTGTTAGAGATGTTGAGTGGCATCAGAAATAATCACTTCAAGAATCAAGATCATCCCCATAACCTTTTGGGACAGGGGAGAGCATTGGAATTCATGGATGCTAGCATCCCATCTGAATTACTAAGGTGCCTACAAGTTGGCCTTCTGTGTGTTCAAAAGCTCCCTGAAGACAGACCCGATATGTCTTCTGTGGTCTCACACTAG 1002 0.4032 MIWSTNSSGSIQEPLAKMLDSGNLVLKDGEINMILLIAHEFPELVIRQGIWNGVAFNSDDWTSFTGMALRPQLSVTKNEVVNWDEPGDRLSRASWLLDLVGNLVDIRLFISENSLQLDLYVRLAASEIGHRNKNEEQASPLFDIDTILAATDSFSIENKIGQGGFGPVYKGILAQGKEIGVKRLSKTSKQGVTEFMNEVGLVAKLQRRNLRIESQDSDFGVSHILEGDSSAVTTNKIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEMLSGIRNNHFKNQDHPHNLLGQGRALEFMDASIPSELLRCLQVGLLCVQKLPEDRPDMSSVVSH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0311 333 ProSiteProfiles Bulb-type lectin domain profile. 1 39 IPR001480 -
Mtr2g0311 333 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 130 210 - -
Mtr2g0311 333 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 39 92 - -
Mtr2g0311 333 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 215 331 - -
Mtr2g0311 333 Gene3D Transferase(Phosphotransferase) domain 1 210 333 - -
Mtr2g0311 333 SUPERFAMILY Protein kinase-like (PK-like) 151 333 IPR011009 -
Mtr2g0311 333 Gene3D Phosphorylase Kinase; domain 1 120 209 - -
Mtr2g0311 333 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 130 210 - -
Mtr2g0311 333 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 215 331 - -
Mtr2g0311 333 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 39 92 - -
Mtr2g0311 333 ProSiteProfiles Protein kinase domain profile. 1 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0311 333 Pfam Protein tyrosine and serine/threonine kinase 217 332 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0311 Mtr-Chr2 3056538 3058937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0311 142 331 Receptor kinase-like Gene Family AT4G23280 37.069 1.84e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g0311 PK_Tyr_Ser-Thr 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0311 - - mtr:MTR_2g012350 508.449