Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0301 ATGTTGAGTTTCGGTTTCTGTGAACGTTTTTGTAAAACTCTCCGTGACAATCGCAAAACCATTAAGTTTGTTCTCATCGGCACCACCGTAAGTGGTGTTGGTTATGTGGCATATCGCGAGTTTTATCCATCGGAAGTGGAGGCGGTTACCGATAGGAAAAAAGTGGTGGTGCTGGGAACAGGATGGGCGGCAACAAGTTTTATGAAGAATCTGGACAGTCCAAAGTATGAAGTACAGGTGGTTTCGCCTCGTAACTATTTTGCATTCACTCCTTTGCTTCCTAGCGTCACTTGCGGCACTGTTGAAGCGCGTAGCATTGTTGAACCTGTTCGCAATATTTTTAGGAAGAAAAGGGTGGACGTGCAATTCAGTGAAGCAGAATGCTTCAAGATTGATGCTGAAAATAAGAAAGTTTACTGTAAATCTAATGCAAACAACAATCTTAATGGGCAAGAAGAATTTGTCGTGGACTATGATTACCTAATCATTGGTGTGGGCGCTAAAGTTAACACATTTAACACGCCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCACAGAAGATTAGAAGAACGGTTATTGACTGCTTCGAGAGAGCGAATTTGCCTGATGTAAGCGAGGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGAGGGCCAACTGGAGTGGAGTTCGCAGCTTCACTTCATGACTTCGTCAACGAGGATTTAGTCCATTTATATCCTGGGGTCAAAGATTTAGTAAAAATTACACTTCTGGAAGCTGGAGATCATATTTTGAGCATGTTTGATAAAAGGATAACAGCTTTTGCCGAAGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTAGATGGGAAAGAAATTTCCACTAAAGAGCTGAAAAATGGAGGAAAGATTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATCAAAGATTTCATGGCCCAAATTGGTCAGGCTAGCCGGCGTGCTCTAGCTACTGATGAATGGTTGAGAGTCGAAGGGTGCAACAATGTATATGCGCTTGGTGATTGTGCTACGATAAATCAGCGTAAAGTCATGGAAGATATTGCTTCGATCTTTAAGAAGGCCGACAAAGGCAATTCAGGAACACTTACGGTCAAAGAATTTCAAGAGGTCATGGATGACATCTGTGTACGATATCCTCAGGTTGAGCTGTATCTGAAAAATAAACAGATGCACAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGTTGAAAAAGAATCAATTAAACTGAATATCGAAGAACTCAAAACAGCACTTTCCAAAGTGGATTCTCAGATGAAATTTCTCCCTGCTACTGCACAGGTTGCATCTCAGCAAGGAACTTACCTGGCCAAATGTTTTAACCGGATGGAAGAGTGCGAGGAAAAACCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGTCACCGCTTCAAACCCTTCAGGTACCAACACTTAGGTCAGTTTGCTCCTTTGGGAGGAGAGAAAACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGTCAATGGTTGTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGCTGGCGTACCAGGGCCTTAGTAGTTTCAGACTGGGGAAGGCGTTTTATTTTTGGGAGGGACTCGAGCCGCATCTGA 1737 0.4318 MLSFGFCERFCKTLRDNRKTIKFVLIGTTVSGVGYVAYREFYPSEVEAVTDRKKVVVLGTGWAATSFMKNLDSPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKRVDVQFSEAECFKIDAENKKVYCKSNANNNLNGQEEFVVDYDYLIIGVGAKVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVHLYPGVKDLVKITLLEAGDHILSMFDKRITAFAEDKFQRDGIDVKTGSMVVKVDGKEISTKELKNGGKITTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIASIFKKADKGNSGTLTVKEFQEVMDDICVRYPQVELYLKNKQMHNIADLLKEAKGDVEKESIKLNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEEKPEGPLRFRGEGRHRFKPFRYQHLGQFAPLGGEKTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0301 578 SUPERFAMILY FAD/NAD(P)-binding domain 219 373 IPR036188 -
Mtr2g0301 578 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Mtr2g0301 578 SUPERFAMILY FAD/NAD(P)-binding domain 53 271 IPR036188 -
Mtr2g0301 578 Gene3D - 420 577 - -
Mtr2g0301 578 Gene3D - 46 407 - -
Mtr2g0301 578 Coils Coil 440 460 - -
Mtr2g0301 578 PANTHER NAD(P)H DEHYDROGENASE B2 3 578 - -
Mtr2g0301 578 SUPERFAMILY EF-hand 369 465 IPR011992 -
Mtr2g0301 578 PANTHER NADH DEHYDROGENASE 3 578 IPR045024 GO:0003954|GO:0006116
Mtr2g0301 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 378 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0301 Mtr-Chr2 2917102 2922478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0301 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 72.041 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0301 K03885 - gmx:100802661 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3038 4 44064647 44069318 Mtr2g0301 2 2917102 2922478 PCT