Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0296 ATGGTGAAAAATTCAACGAAGGAAGAATGTCCACCGGACAATCTCCGGTGCAGCCGTACCGACGGCCGACAATGGCGGTGCAAACGTCGAGCGATGGAAAACGTGAAGTTATGCGAAGTTCATCATCTTCAACTTCAACATCGACAGAAGAAAGTGAAGGTTCCAGAATCGTTGAAGCTTCAGAGAAATATGAAGATGAAGAAGAAGAAGAAGCAAAACGACGTCGTTGAAGTTGAAATTAGGTCAAACAAGAAAAAGAAGAAAAGTAAGAAAAACGATGTTGTTGATGTGCAATTGGATTTGATAAGAATGGTGTTACAGAGAGAGGTTGAGAAGAAGAAGAATCCGAATAAGAAGAATGTGAAGAATGTTGATGAAGAATTGGAATTGGTGAAAGTGAATTATAGTGAAGGTGAATTGAGGAAAGAATTACCTAATGGGGTTATGGAAATTGCTCCTGTTTCAACTTCACATCGTCGTGATGATGATGATGATGTTGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCCTTTCTGATAATTTTCAAGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATTTGATAAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGACACTCAAAATGAGGTTAAGAAGGCGTGTCCAGTTTGTCGAGGAACTTGTTCATGTAAAGATTGCCGAGCAAGTCAGTGTAAAGACCGTGAAAGTAAGGATTGTTTGGCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCGGTAATAAAACAAATAAGTGAAGACCAGCATGCAGAGCTAGAAACAGAAGCGAAAAATAAAGGGGAAAGTATTTCTGATATTATCATCAAGCAAATCGAATTTGACTGCAATGAGATAATTGACTGCAACTACTGCAAAACACCTATTCTGAATCTTCACAGAAGCTGCCTTAACTGTTCCTACAGTCTTTGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCATTGACCGAGTTACCTGACAAAATGGACACTTGCATTGCTGATGAAAGTTGCCTTTTCGAAGACAAGAGCATTTCTAGCGACGATGAAACTGATACGTCAATGTTACTGGATTCGACTGGTTTTAATGGTACAACTGACAGTATATCATGCCCTCCTTCAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCCATAAGCTGGATTGAAGACATGGAAGCTAAGGCAGAAGAGATAGTTTGCAGCTATGACGTTCCTGAAATTTTGGATAAAAACTCAAGTTGCTCACTTTGTATTGACACAGATCATAAAACTAACAGACATAAGCAATTTGAAGAAGCTGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCAACATCAATTGCGATCATTTTGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTAGTAGTCCACGACGTGCTCCGAAGTACGAAAAAACTAAGTTGGGATCCTCTGGTCTTGTTCTGTGCTTATCTTGAAAGTAGCATTGCAAGATACGAGAATAATAAAGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGACAGCATTTTACTGGCTCTCTTAAATATCAACCTCGGAAAAATGATTGGCATGAGACACTGAAACTGAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTTATTGGTGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGTCTTCTGAATTTAGCTGCAAATATTCCAGAGGGGAGAGCAATACATGATAAAGGCCCATATGTGCACATTTCTTATGGCTGTGCTGACGACAAAGCTTATTCCGTGCTAAATCTCTCTTATGACTCATATGATGTGGTTAATATTATGGTTTATACCACAGATGTTCCTGTCTCTACAGAACATCTTACTAAAATAACTAAGTTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGGGTCACCGAAGATTACTACTGAAAACGCAGAAGACGCGGAACAAAAGGAACCAGAGAGTATTGTAAACGAAGGAACCGACTTTTACAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGTGAAAGCAATAGCTAGTCAAAGTTTAGAGAACAATACTTCCAGCAATGGAGAATGTGGTTCTGGTTCTGATGCTGAAAAAACAGAAAGCTCTTTACCCTTCCACAAGACAGATCAAAGCACTGAAATGTATTCTGTTGCTCAGTGGGATGTCTTCCGGAGACAGGATGTACCGAAGCTTTTAGAATACGTCAAAAGACACAGGGATGAATTTTGTGATACCAATGAATATGACAGCAATAAGATAGTTCACCCAATTCTAGATCAGAGAATCTTTCTAGACAATACTCACAAAATGAGACTGAAGGAGGAATTCGAAATTGAACCATGGACGTTTGAGCAAAATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTATTGTGTTCAAGTGGTATTGGAATTTATGTCTTCTGAGAGTGTTGCTGAGTGTATCCAATTGACTGATGAGATCCATCTGCTTCCAGAAAACCACAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAAATGGCTCTTCATAGCATGGATATGGCGATAAAAGAAATACGCGAGCTCACTTCCAATCCAAAACATGATTTAGCTAAAATAGATTCTTAG 2910 0.3887 MVKNSTKEECPPDNLRCSRTDGRQWRCKRRAMENVKLCEVHHLQLQHRQKKVKVPESLKLQRNMKMKKKKKQNDVVEVEIRSNKKKKKSKKNDVVDVQLDLIRMVLQREVEKKKNPNKKNVKNVDEELELVKVNYSEGELRKELPNGVMEIAPVSTSHRRDDDDDVVDFHCNGKAVVTPPYFRSKNVDRRVLSDNFQVLKKCRRKKCHWCQSSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCSCKDCRASQCKDRESKDCLAGTSRVDRILHFHYLVCMLLPVIKQISEDQHAELETEAKNKGESISDIIIKQIEFDCNEIIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPLTELPDKMDTCIADESCLFEDKSISSDDETDTSMLLDSTGFNGTTDSISCPPSELGGCGNDNLDLRCVFPISWIEDMEAKAEEIVCSYDVPEILDKNSSCSLCIDTDHKTNRHKQFEEAARREDSNDNCLFYPTVFNINCDHFEHFQKHWGKGHPVVVHDVLRSTKKLSWDPLVLFCAYLESSIARYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHETLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANIPEGRAIHDKGPYVHISYGCADDKAYSVLNLSYDSYDVVNIMVYTTDVPVSTEHLTKITKLLKKHRTLCQRGSPKITTENAEDAEQKEPESIVNEGTDFYRRVNRTSYISTEVKAIASQSLENNTSSNGECGSGSDAEKTESSLPFHKTDQSTEMYSVAQWDVFRRQDVPKLLEYVKRHRDEFCDTNEYDSNKIVHPILDQRIFLDNTHKMRLKEEFEIEPWTFEQNVGEAIIIPAGCPYQIRNSKYCVQVVLEFMSSESVAECIQLTDEIHLLPENHKAKVDKIEVKKMALHSMDMAIKEIRELTSNPKHDLAKIDS* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0296 969 Pfam JmjC domain, hydroxylase 795 905 IPR003347 -
Mtr2g0296 969 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 7 958 IPR045109 GO:0032454|GO:0033169
Mtr2g0296 969 MobiDBLite consensus disorder prediction 724 743 - -
Mtr2g0296 969 ProSiteProfiles Zinc finger RING-type profile. 207 253 IPR001841 -
Mtr2g0296 969 SMART cupin_9 622 923 IPR003347 -
Mtr2g0296 969 ProSiteProfiles WRC domain profile. 11 55 IPR014977 -
Mtr2g0296 969 MobiDBLite consensus disorder prediction 729 743 - -
Mtr2g0296 969 SUPERFAMILY Clavaminate synthase-like 519 953 - -
Mtr2g0296 969 MobiDBLite consensus disorder prediction 771 799 - -
Mtr2g0296 969 ProSiteProfiles JmjC domain profile. 641 923 IPR003347 -
Mtr2g0296 969 Gene3D Cupin 513 932 - -
Mtr2g0296 969 ProSitePatterns TNFR/NGFR family cysteine-rich region signature. 233 274 IPR001368 GO:0005515
Mtr2g0296 969 PANTHER PROTEIN B160 7 958 - -
Mtr2g0296 969 Pfam WRC 12 53 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0296 Mtr-Chr2 2853395 2859372 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr2g0296 JmjC 1.6e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0296 K15601 - gmx:100799234 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3047 4 44203285 44210165 Mtr2g0296 2 2853395 2859372 PCT