Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0294 ATGAATTTGTTGGGTCTGCTCGGAATTCATGTTGAAAGAGGAGTCAATCTTGCTATCAGGGATGTAATTAGCAGTGATCCTTATGTTATCATCAAAATGGGAAAACAGAAGCTGAAAACTAGGGTAGTGAAGAAGAATCTAAATCCTAAGTGGAATGACGACTTGACATTAACCATTTCAGATCCTCATACTCCAATTCATCTACATGTGTACGATAAGGACAGATTTAGCATGGATGACAAAATGGGGGATGCTGAGTTTGACATCAGTCCATTTGTGGAAGCAGTAAAGATGCGGTTGCAAGGTCTCCCAAATGATACTATAATTACAAGGGTGCAACCTAGCAGACAAAATTGTTTAGCAGGAGAGAGTCACATTGTTTTGAAAAATGGTAAAGTTGTCCAAAAGTTGGTTCTTAGATTAAGAAATGTTGAATGTGGGGAAGTGGAGATTCAATTGCATTGGATTGACATTCCTGGTTCAAAGGCTCTTTAG 495 0.3859 MNLLGLLGIHVERGVNLAIRDVISSDPYVIIKMGKQKLKTRVVKKNLNPKWNDDLTLTISDPHTPIHLHVYDKDRFSMDDKMGDAEFDISPFVEAVKMRLQGLPNDTIITRVQPSRQNCLAGESHIVLKNGKVVQKLVLRLRNVECGEVEIQLHWIDIPGSKAL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0294 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 156 IPR035892 -
Mtr2g0294 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 2 163 - -
Mtr2g0294 164 SMART C2_3c 6 101 IPR000008 -
Mtr2g0294 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 163 IPR044562 -
Mtr2g0294 164 CDD C2_ArfGAP 4 147 - -
Mtr2g0294 164 Gene3D C2 domain 4 163 IPR035892 -
Mtr2g0294 164 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mtr2g0294 164 Pfam C2 domain 6 91 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0294 Mtr-Chr2 2836379 2838091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0294 37 164 C2H2 Transcription Factor Family AT1G70790 60.000 8.32e-53 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0294 - - gmx:100793531 286.574