Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0280 ATGAATCTAAACATGTTACATATTTTATTCACTCTTTTAATCCTTTACATGATCAAAATTGGTAGTGCTTCTATGTACACAATTACATCTTCTAAATTGATCAAAGATTCTGAAACTATAAGCTCAAATGATGATGCATTCAAGCTTGGATTCTTCAGCCCAATGAACACAACAAATCGCTACGTAGGAATCTGGTATCTCAATCAATCCAACATAATATGGGTAGCCAATAGAGAAAAACCACTACAAGATTCTTCTGGGGTTATCACCATGTCTGATGACAACACAAACCTTGTAGTACTGAATGGACAAAAACATGTTATATGGTCCTCAAATGTCTCCAATTTTGCATCAAATTTTAATGTCACAGCTTATATTCAAAATACTGGAAACCTCGTCTTGCAGGAAGACACTACAGGCAAGATAATATGGGAGAGTTTCAAACATCCATCTGATGCAGTCCTCCTAAATATGACAATTAGCACCAACCAAAAAACAGGGGAAAAAGTAAAACTCACTTCTTGGAAAACTCCTTCAGATCCAGCTTATGGAAACTTCTCTTTTAGCCTCGAGCGTCTCAACGCTCCTGAAGTGTTTGTATGGAACCAAACAAAACCTTACTGGCGCTCAGGTCCATGGAATGGTCAAGTGTTTATTGGTTTACCAAGCCGTTCATTGTATACTTCTGGATATCTAAATGGATTCAGCATTGCAAGGAAAGATAATGGAAATGTTGTTGAGCTTATGTTTACACTACTAAATAGTTCTGATTTTGGAACCCTTGTGGTGAGTTCTGAAGGCAAGCTGGTTTACACTTCATGGATCAATAGGTATCAAGTTGGGACGAATGTTCCTCAACAAAATGAATGTGACATTTATGGTTATTGTGGTCCTAATGGAAGTTGCGATTTGAAAAATTTGCCAATATGCACATGTTTAGAAGGTTTTGAGCCAAAAAATGTAGACGAATGGAATAAACAGAATTGGAGTAGTGGGTGTGTGAGAAGGGCATCCCTACAATGTGAGAGGGTGAAATATAATGGGAGTGCGTTAGGTGGCAAAGGAGATGATTTTGTGAAACTCGAGACGACAAAAGTACCAGATTTTGTGCAACAGTCATATCTTTCTGTTAATGCATGTAGAGCTGAGTGCTTGAATAATTGTAATTGCACGGCTTACGCATTTGATGATGGAATTCAGTGCTTGACTTGGAGTGGTAATTTAATTGACATAGTCAGGTTTTCAAGTGCAGGCACCGATCTTTACATACGCCAAGCTTATTCAGAACTTTCTATAGATACAAAAGGGAAGAGAAATGTTAGAAAAATCATCATATCAACAGTGGTAGTGGGAGCAATTATTTTTGCTACTTGTACCTATTTCTTATGGTCATGGGCTTCAAAACATTCAGGGAGAAGGAAAGAACCAAATTCGTTGATATTGAACACAAGACAAAGCTATCCAGAAAACCAAAATGCAAGTACGATTAAAAATGTGAAACAAATCAAAATAGAGGACCTTACATTATTTGAGTTCCAGAAAATTTCAGCTGCAACAAATAATTTTGGTTCAGCTAATAAGATTGGTCAGGGTGGTTTTGGTTCAGTGTACAAGGGAAAATTGCCCGGTGGACGAGAAATAGCAGTGAAAAGACTTGCTAGAACTTCAAGCCAAGGGATAGAAGAATTTATGAATGAAGTGATTGTAATTTCAGAGCTTCAACATCGTAATCTTCTAAGACTTTTAGGCTGCTGCATCGAAGAGGAAGAAAAAATGCTGGTCTATGAGTATATGCCTAATAACAGTTTAGATTTTTATCTATTTGATCCAATAAAAAAGAAGATTTTAGATTGGCAAAAACGCTTATACATAATTGAAGGAATCTCTCGCGGACTGCTTTATCTTCATAGAGATTCGAGATTAAGAATAATCCATAGAGACCTAAAACCGAGTAATATTTTGTTGGATGGAGAACTGAATCCAAAAATATCCGACTTTGGCATGGCTAGAATCTTCGGAGGTAGCGAAAACGAGGGAAATACAAGAAGGATTGTGGGAACATATGGATACATGTCTCCGGAATATGCAATGGAAGGATTGTTTTCAGAGAAATCAGATGTATTTAGTTTTGGGGTTTTGCTCTTGGAGATAATAAGTGGTAGGAAAAATACAAGTTTCTATAATCATCAAGCACTCACTCTCTTAGGATATACATGGAAACTATGGAATGAAGATGAGGTTGTAGCTTTGATAGATCAAGAAATATGTAATGCTGATTATGTGGGTAACATTTTGAGATGCATACACATTGGACTTCTTTGTGTGCAAGAAATTGCAAAGGAGAGACCTACTATGGCCACAGTTGTTTCAATGCTTAATAGTGAGATTGTTAAACTTCCTCATCCATCTCAACCTGCATTCCTTCTAAGTCAGACTGAGCATAGAGCAGACTCAGGTCAACAAAATAACGACTCGAATAACAGTGTCACTGTCACAAGCTTGCAAGGCAGATAG 2514 0.3715 MNLNMLHILFTLLILYMIKIGSASMYTITSSKLIKDSETISSNDDAFKLGFFSPMNTTNRYVGIWYLNQSNIIWVANREKPLQDSSGVITMSDDNTNLVVLNGQKHVIWSSNVSNFASNFNVTAYIQNTGNLVLQEDTTGKIIWESFKHPSDAVLLNMTISTNQKTGEKVKLTSWKTPSDPAYGNFSFSLERLNAPEVFVWNQTKPYWRSGPWNGQVFIGLPSRSLYTSGYLNGFSIARKDNGNVVELMFTLLNSSDFGTLVVSSEGKLVYTSWINRYQVGTNVPQQNECDIYGYCGPNGSCDLKNLPICTCLEGFEPKNVDEWNKQNWSSGCVRRASLQCERVKYNGSALGGKGDDFVKLETTKVPDFVQQSYLSVNACRAECLNNCNCTAYAFDDGIQCLTWSGNLIDIVRFSSAGTDLYIRQAYSELSIDTKGKRNVRKIIISTVVVGAIIFATCTYFLWSWASKHSGRRKEPNSLILNTRQSYPENQNASTIKNVKQIKIEDLTLFEFQKISAATNNFGSANKIGQGGFGSVYKGKLPGGREIAVKRLARTSSQGIEEFMNEVIVISELQHRNLLRLLGCCIEEEEKMLVYEYMPNNSLDFYLFDPIKKKILDWQKRLYIIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGSENEGNTRRIVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHQALTLLGYTWKLWNEDEVVALIDQEICNADYVGNILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKLPHPSQPAFLLSQTEHRADSGQQNNDSNNSVTVTSLQGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0280 837 Pfam D-mannose binding lectin 72 176 IPR001480 -
Mtr2g0280 837 SMART blect_4 31 150 IPR001480 -
Mtr2g0280 837 CDD B_lectin 31 150 IPR001480 -
Mtr2g0280 837 MobiDBLite consensus disorder prediction 813 837 - -
Mtr2g0280 837 Gene3D Phosphorylase Kinase; domain 1 482 597 - -
Mtr2g0280 837 SUPERFAMILY Hairpin loop containing domain-like 356 422 - -
Mtr2g0280 837 SMART serkin_6 522 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0280 837 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Mtr2g0280 837 Gene3D - 21 148 IPR036426 -
Mtr2g0280 837 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 836 - -
Mtr2g0280 837 Pfam S-locus glycoprotein domain 208 320 IPR000858 GO:0048544
Mtr2g0280 837 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Mtr2g0280 837 PIRSF SRK 1 837 IPR024171 GO:0004674
Mtr2g0280 837 SMART ntp_6 353 425 IPR003609 -
Mtr2g0280 837 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Mtr2g0280 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Mtr2g0280 837 ProSiteProfiles PAN/Apple domain profile. 341 426 IPR003609 -
Mtr2g0280 837 SUPERFAMILY Protein kinase-like (PK-like) 507 792 IPR011009 -
Mtr2g0280 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 215 IPR036426 -
Mtr2g0280 837 ProSiteProfiles Protein kinase domain profile. 522 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0280 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 836 - -
Mtr2g0280 837 Pfam Protein tyrosine and serine/threonine kinase 526 792 IPR001245 GO:0004672|GO:0006468
Mtr2g0280 837 Pfam PAN-like domain 354 411 IPR003609 -
Mtr2g0280 837 CDD STKc_IRAK 528 793 - -
Mtr2g0280 837 CDD PAN_AP_plant 339 424 - -
Mtr2g0280 837 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0280 Mtr-Chr2 2724212 2729496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0280 510 834 Receptor kinase-like Gene Family AT4G05200 56.748 9.66e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g0280 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0280 - - gmx:112998788 1102.81