Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0278 ATGATGCTCACAACATATCAACCTTTTGTTTTTTTAACGTTGTTGTTATGTTTCCTATGTTTCTGTTCTGAACTTTCACATGCAGCATCAAGTTCGAGAGTCAGTATCAAACATGGTGAATTCATCAGAGACAAAGAAGGTGAAGTTTTAGTCTCAGATGGCTACAACTTCGTGATGGGTTTCTTTGGGTTTGAAAATTCTTCTTCACGTTACGTTGGTATTTGGTACTACAACATTCCTGGACCCGAAGTTATTTGGGTTGCAAACAGAAACAAACCCATCAATGGAAACGGTGGTTCCTTCACTGTATCAACAAACGGAAACTTAGTTATCCTTGATGGAAACAAAAACCAACTTTGGTCAACCAATGTTTCTATCATCCAAACCAATAAGAATAACTCGGAAGCTGTTCTTCGAGATGATGGTAATCTTGTTCTTTCAAATGAGAAAGTGGTGTTATGGGAAAGCTTTGAGAATCCAAGCGATACTTATGTACCTGGTATGAAAGTTCCTGTTAATGGGAAGAGTTTTTTCTTCACTTCATGGAAATCAAGTACAGATCCTTCATTAGGGAACCATACTATGGGAGTTGATCCTGCAGGGTTACCAACACAGATAGTAGTTTGGGAGGGAGACAGAAGAACATGGAGAAGTGGTTATTGGGATGGTAGAATTTTTACTGGTGTTGATATGACAGGTAGTTTTCTTCATGGTTTTATACTTAATTATGATAGTAATGGAGATAGGTCTTTTGTTTATAATGATAACGAGTTGAAGGAGAATGATAATAGTTCAGTGAGGTTTCAGATTGGTTGGGATGGTATTGAAAGAGAGTTTCTATGGAAAGAAAATGAGAAACGTTGGACTGAGATACAAAAAGGGCCTCATAATGTGTGTGAGGTTTATAACTATTGTGGTGATTTTGCAGCTTGTGAATTGTCGGTTTCGGGTTCGGCTATTTGTAATTGCTTAAAAGGGTTTGAACTGAAGGATAAGAGGAATTTGTCAAGTGGATGTAGGAGGATGACAGCATTGAAGGGTGATCAGAGGAATGGTAGTTTTGGTGAGGATGGTTTTTTGGTGCGTGGGAGTATGAAGTTACCTGATTTTGCGCGTGTGGTTGATACGAAAGATTGTAAAGGTAATTGTTTACAGAATGGTTCTTGTACTGCTTATGCAGAAGTTATTGGAATTGGTTGTATGGTTTGGTATGGAGATTTGGTTGATATTCTACACTTTCAACATGGAGAAGGAAACGCTCTGCACATTCGTCTCGCTTATTCTGATTTAGGCGATGGAGGGAAAAATGAAAAGATTATGATGGTGATAATATTAACTTCTCTAGCGGGGTTAATTTGCATAGGAATCATTGTATTGTTGGTATGGAGGTACAAGAGACAACTCAAAGCTTCATGTTCCAAAAATAGTGATGTACTACCGGTCTTTGATGCACACAAGAGCAGAGAGATGTCAGCAGAAATTCCCGGATCAGTTGAACTTGGTTTGGAAGGGAATCAACTAAGCAAAGTAGAGCTTCCATTTTTCAATTTTAGTTGCATGTCATCAGCAACCAACAATTTTTCTGAAGAAAATAAGCTCGGGCAAGGCGGTTTCGGTCCTGTGTACAAGGGAAAGCTTCCGTCTGGAGAAGAAATAGCGGTCAAAAGGCTTTCGAGACGGTCTGGCCAAGGTTTAGACGAGTTCAAGAATGAAATGAGGTTGTTTGCACAACTGCAACATAGAAATCTGGTTAAACTTATGGGATGTTCTATTGAAGGAGATGAAAAGTTGCTTGTATACGAATTCATGCTGAACAAAAGCTTGGATCGCTTTTTATTTGATCCTATCAAGAAAACACAATTAGACTGGGCAAGACGTTATGAAATCATTGAAGGAATTGCAAGAGGACTCCTTTATCTGCATCGTGATTCAAGACTCAGAATAATTCATCGAGATCTAAAAGCAAGTAACATTTTGTTAGATGAAAACATGAATCCAAAAATATCTGACTTTGGCTTGGCCCGGATATTCGGTGGAAATCAAAATGAAGAGAATGCAACCAAAGTGGTTGGTACATATGGTTATATGTCTCCTGAATACGCTATGGAAGGCCTAGTTTCAGTCAAATCAGATGTATATAGTTTTGGTGTATTACTACTAGAGATTGTGAGCGGCCGCAGAAACACTAGCTTTCGTCACTCAGATGATTCGAGTCTAATAGGTTATGCATGGAATCTTTGGAATGAACGCAGAGCAATGGAACTTCTTGATCCTTGCATTCGTGATTCGAGTCCTACGAACAAAGCTTTGAGATGTATACAAATAGGGATGTTATGTGTGCAAGATTCAGCATCTCATAGACCAAATATGTCCAAAGTTGTGTTGTTGCTTGAGAGTGAAGCAACGACTCTTCCCATACCTACGCAGCCTTTGATTACTTCCATGAGGAGATCTGAGGATAGAGAGTTTTACATGGATGGTCTTGATTGTTCAAATGATCTCACAGTTACAATGGTAGCAGGGAGATAA 2529 0.3891 MMLTTYQPFVFLTLLLCFLCFCSELSHAASSSRVSIKHGEFIRDKEGEVLVSDGYNFVMGFFGFENSSSRYVGIWYYNIPGPEVIWVANRNKPINGNGGSFTVSTNGNLVILDGNKNQLWSTNVSIIQTNKNNSEAVLRDDGNLVLSNEKVVLWESFENPSDTYVPGMKVPVNGKSFFFTSWKSSTDPSLGNHTMGVDPAGLPTQIVVWEGDRRTWRSGYWDGRIFTGVDMTGSFLHGFILNYDSNGDRSFVYNDNELKENDNSSVRFQIGWDGIEREFLWKENEKRWTEIQKGPHNVCEVYNYCGDFAACELSVSGSAICNCLKGFELKDKRNLSSGCRRMTALKGDQRNGSFGEDGFLVRGSMKLPDFARVVDTKDCKGNCLQNGSCTAYAEVIGIGCMVWYGDLVDILHFQHGEGNALHIRLAYSDLGDGGKNEKIMMVIILTSLAGLICIGIIVLLVWRYKRQLKASCSKNSDVLPVFDAHKSREMSAEIPGSVELGLEGNQLSKVELPFFNFSCMSSATNNFSEENKLGQGGFGPVYKGKLPSGEEIAVKRLSRRSGQGLDEFKNEMRLFAQLQHRNLVKLMGCSIEGDEKLLVYEFMLNKSLDRFLFDPIKKTQLDWARRYEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEENATKVVGTYGYMSPEYAMEGLVSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDSSLIGYAWNLWNERRAMELLDPCIRDSSPTNKALRCIQIGMLCVQDSASHRPNMSKVVLLLESEATTLPIPTQPLITSMRRSEDREFYMDGLDCSNDLTVTMVAGR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0278 842 Pfam S-locus glycoprotein domain 216 330 IPR000858 GO:0048544
Mtr2g0278 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mtr2g0278 842 SMART serkin_6 527 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0278 842 CDD STKc_IRAK 533 798 - -
Mtr2g0278 842 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Mtr2g0278 842 PIRSF SRK 4 842 IPR024171 GO:0004674
Mtr2g0278 842 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Mtr2g0278 842 ProSiteProfiles Protein kinase domain profile. 527 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0278 842 CDD PAN_AP_plant 352 426 - -
Mtr2g0278 842 Pfam Protein tyrosine and serine/threonine kinase 530 795 IPR001245 GO:0004672|GO:0006468
Mtr2g0278 842 ProSiteProfiles PAN/Apple domain profile. 339 426 IPR003609 -
Mtr2g0278 842 Gene3D Phosphorylase Kinase; domain 1 499 602 - -
Mtr2g0278 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 188 IPR036426 -
Mtr2g0278 842 Pfam D-mannose binding lectin 84 183 IPR001480 -
Mtr2g0278 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 842 - -
Mtr2g0278 842 SMART blect_4 41 160 IPR001480 -
Mtr2g0278 842 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 842 - -
Mtr2g0278 842 Gene3D - 31 157 IPR036426 -
Mtr2g0278 842 SUPERFAMILY Protein kinase-like (PK-like) 512 825 IPR011009 -
Mtr2g0278 842 CDD B_lectin 47 160 IPR001480 -
Mtr2g0278 842 Pfam PAN-like domain 355 410 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0278 Mtr-Chr2 2705645 2709289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0278 431 820 Receptor kinase-like Gene Family AT4G05200 49.109 9.14e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g0278 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0278 - - aprc:113869342 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3050 4 44227490 44231498 Mtr2g0278 2 2705645 2709289 PCT
Mtr2g0278 2 2705645 2709289 Mtr4g3055 4 44286151 44293086 PCT