Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0273 ATGGAGAAAACTGAGTTCATCTTTCTACTTCTTGCTACTTGTTTCCATTTAACAACATTGTTTCCAATACCTTCAAAAGCAGAAGATACCATAACTCCACCACAATTCATCACTGGTAACCAAACACTAATTTCACCTTCACAAAATTTTGAACTTGGTTTCTTTACACCTAAAAATTCCACTTACACTTATCTTGGAATATGGTATAAGCAAATTCACATAAAGAATATTGTTTGGGTTGCAAATAGAGATAAACCACTTCTTGATCACAATGGTACATTAACATTCAACAATGATGGAAAACTCATTATTCTTAACTACGGAGGAAGTGTTCTATGGGCCTCAAATTCATCTGGACCGGCAAAAACTCCGGTAGCACAGCTTCTAGACACTGGAAACTTTGTCTTGAAGAACTTTGAAGATGAAAACTCAGAAGAAATTTTGTGGCAAAGTTTCGATTATCCTTCTAATACATTGTTACCAGGAATGAAACTTGGTAGGAACTTCAAAACTGGTTTGAACATTCATTTAACTTCTTGGAAGAACATTGATAATCCTTCTTCAGGTGAATATAGTTATAGCGTTGATCCACGTGGACTTCCTCAGCTTTTTCTTCAAAAGGGTAAGAAGAAAATTTTCAGAAGTGGACCATGGTATGTGGAACAATACAAAGGTGATCCAGTTCTAAGGGAAAATCCAATTTTCAAACCGGTTTTTGTTTTTGATTCTGATGAAGTTTATTACTCTTTTGAGACTAAAGACGACATTGTTTCAAGATTTGTGCTTAGTGAATCTGGTTTAATTCAGCATTTCACATGGAACGATCATCGTTCGAATTGGTTTTCTGAGTTTAATGTTCAAGGCGACCGATGTGATGATTATGGTATTTGCGGTGCTTATGGAACTTGTAACATAAAAAACTCTCCAATTTGCAAGTGTTTGAATGGTTTTGAGCCAAGGAATATGCATGATTGGAAAATGCTTGATTGGTCTAGTGGATGTGTTAGGGAAAATTCAAAAGTTTGTAGAAATGGCGATGTATTTAAGAAGTTTATAGGAATGAAACTACCAGATTCTGTAGAGTTTCATGTAAACTATAGCATTAACATTGATCAATGTGAGGTAGAATGCTCTAAGAATTGTTCTTGTGTTGCTTATGCAAAACTTGATATAAATGCTAGTGGTAATGGTTGTATTGCTTGGTTTGGAGACTTATTTGATATAAGGGAGGATTCTGTGAATGAACAAGATTTCTTTGTAAGAGTTTCAGCTTCAGAACTAGATTCAAATGTTGAGAGAAACAAAAGGAAGAAACTGATACTACTCTTTGTGAGTATATCAGTAGCCTCTACTATTATTACCTCAGCATTGTGGTTGATAATTAAGAAATGGAGAAGAAATAGAGCCAAAGAGACTGGTATTCGACTTAGTGTTGACACAAGTAAGAGTGAGTTTGAACTCCCATTTTTTGAGATTGCCATTATTGAAGCTGCAACAAGGAATTTCTCTTTTTACAATAAGATTGGAGAAGGTGGATTTGGTCCTGTATACAAAGGCCAGCTTCCATCTGGACAAGAAATAGCAGTGAAAAGGCTCTCGGAGAATTCTGGACAAGGCTTGCAAGAATTCAAGAATGAGGTCATATTCATCTCACAACTTCAACATCGAAATCTCGTCAAGCTTCTTGGTTGTTGTATTCAAGGAGAAGATAAAATGTTGGTCTATGAATATATGCCAAATAGAAGCTTGGACTCTTTATTATTTGATGAAACCAAGCGTTCTGCGCTTAGTTGGCAAAAGAGGCTAGACATTATTGACGGCATTGCTAGGGGACTTGTCTATCTTCATAGAGATTCAAGACTAAGAATAATTCATAGAGATCTAAAAGCAAGCAATGTTCTTTTAGATGGCGAAATGAATCCAAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACTGAAGAAAAGACCAAAAGGGTAGTTGGAACATATGGATACATGCCTCCAGAGTACGCAATGGATGGACATTTCTCTTTCAAATCTGATGTTTATAGCTTTGGAGTTTTACTTTTAGAGCTGTTGAGTGGCAAGAAAAACAGAGGATTTTTTCACCCTGATCACAAGTTGAATCTCTTAGGCCATGCATGGAAGCTTTGGAACGAAGGTAAAGTCATTGAGTTAATGGATCCATTACTTGAGGATCAAGTGTCTACCCCTGAATCCATTTTAAAGTGTATTCAAATAGGTCTTTTATGTGTTCAACAACATCCAGAAGAAAGACCAACAATGTCATCAGTGGTATTGATGTTGGATGGTGAAAGTGTGTTGCTCCCAAAACCTAGAAGGCCAGGTTTGTATTCAGAGAGGTGTTTCTTAGAGACAGATTCATCATCACGTGGTATGCTCAATTCTGGTTCCAATGACATAACTGTTACCACAACTGTAGTAGAGGGTCGTTATTTAGGTACTTGCCTCTCCACTACTTGTGCTATAAAAAGCCTCTTATTTAATACAACAATAATATACATATTTAGTATTTGTTTGTGA 2559 0.3615 MEKTEFIFLLLATCFHLTTLFPIPSKAEDTITPPQFITGNQTLISPSQNFELGFFTPKNSTYTYLGIWYKQIHIKNIVWVANRDKPLLDHNGTLTFNNDGKLIILNYGGSVLWASNSSGPAKTPVAQLLDTGNFVLKNFEDENSEEILWQSFDYPSNTLLPGMKLGRNFKTGLNIHLTSWKNIDNPSSGEYSYSVDPRGLPQLFLQKGKKKIFRSGPWYVEQYKGDPVLRENPIFKPVFVFDSDEVYYSFETKDDIVSRFVLSESGLIQHFTWNDHRSNWFSEFNVQGDRCDDYGICGAYGTCNIKNSPICKCLNGFEPRNMHDWKMLDWSSGCVRENSKVCRNGDVFKKFIGMKLPDSVEFHVNYSINIDQCEVECSKNCSCVAYAKLDINASGNGCIAWFGDLFDIREDSVNEQDFFVRVSASELDSNVERNKRKKLILLFVSISVASTIITSALWLIIKKWRRNRAKETGIRLSVDTSKSEFELPFFEIAIIEAATRNFSFYNKIGEGGFGPVYKGQLPSGQEIAVKRLSENSGQGLQEFKNEVIFISQLQHRNLVKLLGCCIQGEDKMLVYEYMPNRSLDSLLFDETKRSALSWQKRLDIIDGIARGLVYLHRDSRLRIIHRDLKASNVLLDGEMNPKISDFGMARMFGGDQTEEKTKRVVGTYGYMPPEYAMDGHFSFKSDVYSFGVLLLELLSGKKNRGFFHPDHKLNLLGHAWKLWNEGKVIELMDPLLEDQVSTPESILKCIQIGLLCVQQHPEERPTMSSVVLMLDGESVLLPKPRRPGLYSERCFLETDSSSRGMLNSGSNDITVTTTVVEGRYLGTCLSTTCAIKSLLFNTTIIYIFSICL* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0273 852 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Mtr2g0273 852 SMART blect_4 34 155 IPR001480 -
Mtr2g0273 852 Pfam PAN-like domain 342 408 IPR003609 -
Mtr2g0273 852 SMART serkin_6 502 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0273 852 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Mtr2g0273 852 Gene3D - 23 152 IPR036426 -
Mtr2g0273 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mtr2g0273 852 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Mtr2g0273 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Mtr2g0273 852 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Mtr2g0273 852 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Mtr2g0273 852 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 818 - -
Mtr2g0273 852 CDD PAN_AP_plant 342 423 - -
Mtr2g0273 852 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 19 818 - -
Mtr2g0273 852 SUPERFAMILY Protein kinase-like (PK-like) 484 774 IPR011009 -
Mtr2g0273 852 PIRSF SRK 1 823 IPR024171 GO:0004674
Mtr2g0273 852 ProSiteProfiles Protein kinase domain profile. 502 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0273 852 Pfam D-mannose binding lectin 77 181 IPR001480 -
Mtr2g0273 852 SMART ntp_6 343 422 IPR003609 -
Mtr2g0273 852 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Mtr2g0273 852 Pfam Protein tyrosine and serine/threonine kinase 503 772 IPR001245 GO:0004672|GO:0006468
Mtr2g0273 852 CDD STKc_IRAK 508 776 - -
Mtr2g0273 852 CDD B_lectin 35 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0273 Mtr-Chr2 2669440 2673329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0273 422 810 Receptor kinase-like Gene Family AT4G05200 50.891 4.57e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g0273 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0273 - - mtr:MTR_2g011150 1601.26