Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0270 ATGGCAGAGGAGTTTCATGCTGGAATTTGTGGTGAAACATGGTGGAATATTAATAATTCAACAAGAAGTGTATTCCCTCTTATGATGAATTCATCATCAACATGTTCTGTTGCAGCTAATGATGTAGGAAACTATAGTACTTGGCAAAATGATTTTTTGGGTTTGAAGGAAACAATAAGAACTTGTTCTGATATTGAAGTTAATAACTTTGATGTTTCTGATTGTTCTCTAAGTTTTCTTGATCCTCAGAAGCCACAAATCATGGGTTTTGACCTCTTATCTCCAACTTCATCTAATTGGAATCAGTCCCTATTTAATGATTCACAAATTCAAAAGGAGTGGAGCACAAAGAATTTGTCATCTACAAGTGGAAGCCAAGTTTCAAGAATGGATCAAGAATTTTCCTTAGAACAACAGAATATGAATTCTGGTTTATCATGTGGATATCCAATTGGATCAGTTAATAATTCCTATAATTACCCTTCAAGTTTGATACAAAGTTTATTTGATCCAGAACTACAACCTGAACCACAACCACAACCACAAAACTCACTTTTTACCAACCCTTCTATGTCCTCCTCCTATTCATCATCCTCCAATGAACTTTCACCAACATGGACTTCCCTTATGAAACATTCAATGCCAAAACAACAGCTTAGTGGATTGCTCTTTTCAAACAATACTCCTTTCTGGAATGCTTCAGCTGATGCCCTTAATGACATCAGAGCTGGAGTTTTTGTTTCGTCACAACCACAACATCAATCTCCTAATTTTGAAGACAACAAATTTAATTCCCCAAATACTCTATTAAACAAGCTGAAAAGAGATAAATCTCCAGAAACGAAAAATTCATCAGAAACTGCAGTTAAGAGGCCAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTCCGGAAAGAGAAGCTAGGGGACCGGATCACAGCCCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGATACAGCATCTGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTTCATGATCAAGTCAATGTTTTGAGCACTCCATATATGAAAAGTGGATCTCCCATTCAACATCAACAGGATTGTGATAATGTGAATGAGTCAGAAGGGAAAAAACAAGATTTAAGAAGCCAAGGACTTTGTTTGGTGCCGATTTCAAGCACATTTCCGATGACTAATGAGACTCCTGTCGACTTCTGGACACCTACTTTTGGAGGTCCACTCTTCGGCCGATAG 1251 0.3773 MAEEFHAGICGETWWNINNSTRSVFPLMMNSSSTCSVAANDVGNYSTWQNDFLGLKETIRTCSDIEVNNFDVSDCSLSFLDPQKPQIMGFDLLSPTSSNWNQSLFNDSQIQKEWSTKNLSSTSGSQVSRMDQEFSLEQQNMNSGLSCGYPIGSVNNSYNYPSSLIQSLFDPELQPEPQPQPQNSLFTNPSMSSSYSSSSNELSPTWTSLMKHSMPKQQLSGLLFSNNTPFWNASADALNDIRAGVFVSSQPQHQSPNFEDNKFNSPNTLLNKLKRDKSPETKNSSETAVKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYMKSGSPIQHQQDCDNVNESEGKKQDLRSQGLCLVPISSTFPMTNETPVDFWTPTFGGPLFGR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0270 416 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 92 404 - -
Mtr2g0270 416 MobiDBLite consensus disorder prediction 179 204 - -
Mtr2g0270 416 MobiDBLite consensus disorder prediction 250 300 - -
Mtr2g0270 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 294 343 IPR011598 GO:0046983
Mtr2g0270 416 CDD bHLH_AtbHLH_like 300 351 IPR045239 -
Mtr2g0270 416 MobiDBLite consensus disorder prediction 273 289 - -
Mtr2g0270 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 361 IPR036638 GO:0046983
Mtr2g0270 416 MobiDBLite consensus disorder prediction 171 204 - -
Mtr2g0270 416 Gene3D - 304 367 IPR036638 GO:0046983
Mtr2g0270 416 PANTHER TRANSCRIPTION FACTOR BHLH123 92 404 - -
Mtr2g0270 416 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0270 Mtr-Chr2 2642733 2645889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0270 1 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 41.686 1.55e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0270 - - gmx:100794682 510.76