Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0260 ATGCTTGAATTTTGTGTTTCTCTAAAGAACAAGCTTCAATGCAAACCCAACAAAAAACATGTTTATGATCCAAAGACAATTAAGCACCAAAAAGGTAAGAATAATCAGAGAACAAAGTCGGGTTTACTCGATCATTCAAATATCATCCAAGGAAGCAAGAGGTTCTTAACAAATTCATCAAGTTTGTATCAAGAATCTGAAGGGAGCATTGAAATAAGTGATCCTATAATCCATGAAATTCTTCATGATAGCTCAATAGGTCAAATTTGTTCGAGTGGACGTAAGGATTTCGAAGGTTCTTTTCGAACAACTAGAAGCGCATCTACATCTTCATGGTTAACCAATCCTGTTGATTATAATGAAGAAAATGTCTCATCTCGAACAAGGTTGTTGGTTCAGATGGATTCTGATGATGGTCCTTCAATTTTGATATGTCACAAGTGTGGTGAGAAACTGAAAAACCTTAATGATGTTGAAACTCACCATATCACTGAACATTATTCAGTGACGGAACTTGAAGAAACTTCATCTAGGAAGATTGTGGAAACAATATGTGAAAGTGGAACAAGCTTTATTAGTTCTGAATTGTGGCAGATTGATTGTATCTTAAAAGTCCACAACATGCCAAAAACATTTCAATGCTTTGAAGAGTATAGAGAAATGGTGAAGATTAATGCCAACAAGCTACAAATTAAGAATCATGCACGTTGCCTTGTTGATGGAAATGAGCTTTTAATGTTTCATGGCACTAACATTGCATGCTCTCTTGGCATAAATGGTTCTTATAGTTTATGCACTTTAGACTATTGTGGTGTATGTCAAATTTTGAGGCATGGTTTTTCTACTAACAAGGAATTTCAAGGTGCATTAGGAGTTTACACAAGTTCCACAAGTGGAAAAGCCTTTGATTCAATTATGCTATCTGATGAGAGAGCATTTACAAGAAAGGCAGTTATAATGTGTAGAGTAATAGCTGGGAGAGTTCATTGTCCTTTTGAAGAAATTCAAGAAAAAATTGATTCAGGATTTGATTCATTTGCTGAAAAGATAAGTGATCATTCAAATATTGAGGAACTATGTTTGTTGAATCCTAAAGCTCTGCTCCCTTGCTTTGTGGTAATCTACAAACAAAAATAG 1137 0.3474 MLEFCVSLKNKLQCKPNKKHVYDPKTIKHQKGKNNQRTKSGLLDHSNIIQGSKRFLTNSSSLYQESEGSIEISDPIIHEILHDSSIGQICSSGRKDFEGSFRTTRSASTSSWLTNPVDYNEENVSSRTRLLVQMDSDDGPSILICHKCGEKLKNLNDVETHHITEHYSVTELEETSSRKIVETICESGTSFISSELWQIDCILKVHNMPKTFQCFEEYREMVKINANKLQIKNHARCLVDGNELLMFHGTNIACSLGINGSYSLCTLDYCGVCQILRHGFSTNKEFQGALGVYTSSTSGKAFDSIMLSDERAFTRKAVIMCRVIAGRVHCPFEEIQEKIDSGFDSFAEKISDHSNIEELCLLNPKALLPCFVVIYKQK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0260 378 Gene3D - 158 378 - -
Mtr2g0260 378 ProSitePatterns Zinc finger C2H2 type domain signature. 145 166 IPR013087 -
Mtr2g0260 378 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 377 - -
Mtr2g0260 378 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 377 - -
Mtr2g0260 378 SUPERFAMILY ADP-ribosylation 174 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0260 Mtr-Chr2 2560966 2562667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0260 7 376 C2H2 Transcription Factor Family AT5G54630 40.444 5.78e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g0260 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0260 - - gmx:100792577 432.565