Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0230 ATGAGTTCTCATATGGAGATTTCATCTATCAGAGGGTTACCTGAAATGGGGATAATGGAGGATCCTAACTTTCTCCATCACTTTAATAATCACCTAAGCTCTATTGATACCAATAACTTAACTGCTTCTGCTTTTGGAGATGCTTTACAAAAGCATATTTTGTCCAATAATCCAAACTTTAACAACAAAACATGCATGGAGACTTCGCCTACCGGAAATGAAAGACCGGCGAAACAGTTAAGAAATAACAGCTGGAATTACAACAATAGTCCTCCAACATCAGATACACAATATGATAATTGTTGCTCTAATAATCTTCTTTCATTTGCTGATTTGAATTACACAAATCAGTTGGGACTATTGAAGCCTAAGTCTGAGATGGTGTGTCCGAAAATCGATAACACTAGTACTCTTGCAAACATGTTGATCACTCAAGGTAACTTGTTTGGGAATCAAAACCATGTCTTTAAAGCTGTTCAAGAGGCTAAAGATATTGAGAATCGTCCTAATAAACTTTCTCAAGCTCATGATCACATAGTAGCCGAAAGGAAGCGTCGCGAGAAACTCAGCCAACGATTCATCGCTTTGTCTGCTCTTGTTCCAAACCTAAAGAAGATGGACAAAGCTTCTGTTCTTGGAGAAGCTATAAGGTACTTAAAGCAAATGGAAGAGAAAGTGAGTGTTCTTGAGGAGGAACAGAAAAGGAAGAAAACTGTGGAATCTGTTGTAATAGTGAAGAAATCTCAACTTTCTATGAATGAGGCTGAAGATCGTGCAGACACTAATAATAGTACATATGATGAGACATTACCTGAAATTGAAGCAAGATTTTGTGAAAGAAGTGTCCTCATAAGACTACATTGTTTGAAGAGTCAAGGAGTTATTGAGAAAATTATGAGTGAAATTGAGAAACTTCATCTAAAAGTCATCAATAGCAGTTCCTTGACTTTTGGGAATTTCACCCTTGATATAACCATCATTGCTCAGATGGATGTGGGATTTTGCATGACGGTGAAGGATCTTGTGAGGAAGATACGTTCAGCATATTCATCTTTCATGTGA 1062 0.3719 MSSHMEISSIRGLPEMGIMEDPNFLHHFNNHLSSIDTNNLTASAFGDALQKHILSNNPNFNNKTCMETSPTGNERPAKQLRNNSWNYNNSPPTSDTQYDNCCSNNLLSFADLNYTNQLGLLKPKSEMVCPKIDNTSTLANMLITQGNLFGNQNHVFKAVQEAKDIENRPNKLSQAHDHIVAERKRREKLSQRFIALSALVPNLKKMDKASVLGEAIRYLKQMEEKVSVLEEEQKRKKTVESVVIVKKSQLSMNEAEDRADTNNSTYDETLPEIEARFCERSVLIRLHCLKSQGVIEKIMSEIEKLHLKVINSSSLTFGNFTLDITIIAQMDVGFCMTVKDLVRKIRSAYSSFM* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0230 353 MobiDBLite consensus disorder prediction 67 96 - -
Mtr2g0230 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Mtr2g0230 353 PANTHER BHLH TRANSCRIPTION FACTOR 6 352 - -
Mtr2g0230 353 CDD bHLH_AtNAI1_like 173 248 - -
Mtr2g0230 353 Pfam Helix-loop-helix DNA-binding domain 178 223 IPR011598 GO:0046983
Mtr2g0230 353 Gene3D - 170 246 IPR036638 GO:0046983
Mtr2g0230 353 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 6 352 - -
Mtr2g0230 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 237 IPR036638 GO:0046983
Mtr2g0230 353 Coils Coil 212 239 - -
Mtr2g0230 353 SMART finulus 179 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0230 Mtr-Chr2 2384974 2387703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0230 173 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 53.684 2.20e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g0230 HLH 9.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0230 - - gmx:100798018 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3112 4 44687274 44689643 Mtr2g0230 2 2384974 2387703 PCT