Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0214 ATGGAAAACTATTCATACCAATCATACCCAGATTCAGGAGATTCATCACCTCATTCTAGAGAAATCGATTTTGAAAACCCACCTACAACAACACCATGGGAAGACCAACAAAACCAAACAAGCTACAAAGCCAAGTTCATGTGCAGCTACGGTGGCAAGATCCAACCACGAACACACGATAATCAACTCTCTTACGTTGGTGGCGAAACCAAAATCCTAGCCGTTGATCGTAACATCAAATTTTCTTCAATGATTTCAAAACTCTCTTCTCTCATCGAAGCACATGATGTTTCCTTTAAATACCAACTCCCTGGTGAAGATCTTGATGCTCTTATTTCTGTCACTAACGACGATGATCTTGATCATATGATGAATGAATATGATCGTCTCTACCGTGCTTCTGCTAGACCTGCACGTATGAGATTATTTCTCTTTGTTAACGATTCTGTTCCGTCGCCCGACCCGGTTAAACCGAGTAACGTTGATTATTTGTTTGGAATTGAGAAGCCAGTTACCGTTGCTCCGATTCCGGCTGCGGTTAAGTTTCATGATGCTGTACCGGAACCTGTTGCTCCGGTGCCGGAATATCATCCAAGGCAAGGTTTGAATCCGTCTGATCGAGTTGTAAGTTCGGATCCTGGTTTGAATTTGAATTTGAATCATCCGGTTGAGATTCAGAGACAGTTACAGAGGATGCAAATTGCGGCGGAGAATGAGCAAACTGCTTATCGGAGAAAAAGTGAAGAGAATTATCCTGTTAGTGGCGGTGATTATTACGTTCAGAAAGTTCCGGAAAAATTTCCGGCGATGTCAAATTTCGCACCACCGTCTCAGCATCAACAACAACAACCTGGTTATTGGACGGAGAGACCTGTTTCCGGTGAGGCTTATCCACCGGTAGCAGCGTCTGGAGGAGGTGAACAGCCTGTTTATATGGTTCCGGCGCCGGGAGCTTACTATCATGCGCCGGTGATGCGTCCACCGGCGAGTCAAGGTTACTACGCAGTTCAAAGAATGCCGTCAGATGCTTACCGTGAAACTCAGGTTTACGGCGGAGCACCACCACCTAAAGCGCCGTTTTCGTCGGGAGTTTCGGCGGCGAGTTATGCACCGGCGCAGCCGGTTAAAGGTCCGGCTTATGCGGAAGGAGTTAGTGTGGTGCGTTCGAGTGGATTACCGGATAACACGTCAGGTTCGTACGCACAGGTGGCGTATGATAGTGCAAGTGGGAGACAGGTTTACTATAATGCACCTCCTGGTGGGGTAGTACACCCTCCTCCACAGTACCAAGGTGTTGCTGCGCCTGTTACCACTGATGTTAAAGTGATGAGCAAGATTTCTCAAGGTTCAGTTTGA 1356 0.469 MENYSYQSYPDSGDSSPHSREIDFENPPTTTPWEDQQNQTSYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFSSMISKLSSLIEAHDVSFKYQLPGEDLDALISVTNDDDLDHMMNEYDRLYRASARPARMRLFLFVNDSVPSPDPVKPSNVDYLFGIEKPVTVAPIPAAVKFHDAVPEPVAPVPEYHPRQGLNPSDRVVSSDPGLNLNLNHPVEIQRQLQRMQIAAENEQTAYRRKSEENYPVSGGDYYVQKVPEKFPAMSNFAPPSQHQQQQPGYWTERPVSGEAYPPVAASGGGEQPVYMVPAPGAYYHAPVMRPPASQGYYAVQRMPSDAYRETQVYGGAPPPKAPFSSGVSAASYAPAQPVKGPAYAEGVSVVRSSGLPDNTSGSYAQVAYDSASGRQVYYNAPPGGVVHPPPQYQGVAAPVTTDVKVMSKISQGSV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0214 451 Pfam PB1 domain 59 146 IPR000270 GO:0005515
Mtr2g0214 451 MobiDBLite consensus disorder prediction 22 38 - -
Mtr2g0214 451 Gene3D - 64 148 - -
Mtr2g0214 451 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 444 - -
Mtr2g0214 451 SUPERFAMILY CAD & PB1 domains 59 151 - -
Mtr2g0214 451 MobiDBLite consensus disorder prediction 1 15 - -
Mtr2g0214 451 PANTHER OS05G0427100 PROTEIN-RELATED 1 444 - -
Mtr2g0214 451 SMART PB1_new 58 147 IPR000270 GO:0005515
Mtr2g0214 451 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g0214 451 CDD PB1_UP2 47 145 - -
Mtr2g0214 451 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0214 Mtr-Chr2 2255384 2257169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0214 38 145 MAP Kinase Kinase Kinase AT5G57610 48.148 1.12e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0214 - - gmx:100780332 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3122 4 44764779 44766595 Mtr2g0214 2 2255384 2257169 PCT