Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0212 ATGGAGTTAGATGATAATGAAGTCGATTTTTCCTCACCGTCAAAAGACGGTAATGATCCAAAAAATACGTCAGTGGAATGGATTCCTGCGTGTGAGGATGAACTCAAACCCGTGATTGGCAAGGTATTTGATACTTTAGTAGAAGGAGGTGATTTTTATAAAGCTTATGCTTATGTTGCTGGTTTTAGTGTGCGTAATTCGATTAAAACCAAAGATAAAGATGGTGTCAAATGGAAATATTTTCTTTGCTCAAAAGAGGGTTTTAAAGAGGAAAAAAAGGTTGACAAGCCACAATTGCTTATTGCTGAAAATAGTTTGTCTAAAAGTAGAAAGAGAAAATTGACGCGCGAGGGATGTAAAGCAAGACTTGTTTTGAAGAGAACTATTGATGGTAAATATGAAGTCTCAAACTTTTATGAAGGTCATTCACATGGGCTAGTCTCACCTTCAAAGAGACAATTCCTAAGGTCAGCAAGAAATGTAACTAGTGTTCATAAGAATATATTGTTTTCCTGCAATAGAGCTAATGTGGGGACTTCAAAAAGTTATCAAATAATGAAGGAGCAGGTCGGAAGTTATGAAAATATAGGATGCACACAAAGAGATTTGCAAAACTATTCAAGAAATTTGAAAGAATTGATCAAAGACTCTGATGCAGATATGTTCATTGATAATTTTAGAAGAAAACGGGAGATAAACCCTTCATTCTTCTATGATTATGAAGCTGACAATGAAGGGAAATTGAAACATGTGTTTTGGGCTGATGGAATTTGTCGAAAAAATTACTCTTTGTTTGGAGATGTGGTTTCATTTGACACAACATACCGCACAAACAAGTATTTTATGATTTTTGCACCATTCACTGGCATAAATCATCATCGTCAAAGCATAACATTTGGGGCTGCTCTTTTGAAAAATGAAAAAGAAGAATCGTTTGTTTGGTTGTTCGAGACATTTTTGAAAGCAATGGGGGGACATAAACCTGTTATGATAATAACAGATCAAGATGGGGGTATGAAGAATGCAATAGGAGCGGTTTTAAAAGGGTCGTCTCATAGATTTTGCATGTGGCATATTCTAAAAAAACTTTCAGAAAAGGTGGGTAGTTCCATGGATGAGAATAGTGGTTTTAATGATCGTTTCAAGTCATGTGTCTGGAACTCAGAGTCCTCGGAAGAATTTGATTTGGAATGGAATAATATTATTAGTGATTACAGCTTGGAAGGAAATGGATGGCTTTCTACAATGTATGATCTAAGAAGCATGTGGATACCGGCATATTTTAAAGATACATTTATGGCTGGAATTTTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCATTCTTTGGCAACTACTTGAATCATAACTTAACTTTAGTAGAATTCTGGGTGCGATTTGATTCTGCTTTAGCAGCACAAAGACACAAAGAACTTTTTGCTGATAATAATACACTTCATTCTAATCCAGAATTGAATATGCACATGAATTTAGAGAAGCACGCTAGAGAGGTTTATACTCATGAAAACTTTTACATATTTCAAAAGGAGTTGTGGAGTGCATGTGTAGATTGTGGAATTGAAGGAACAAAAGAGGAAGGTGAGAATTTATCATTTTCTATACTTGATAATGCTGTGAGAAAACATAGAGAGGTTGTTTATTGTCTTTCTAATAACATTGCACATTGTTCATGCAAAATGTTTGAGTCGGAAGGCATCCCATGTCGACATATTCTTTTTATATTAAAGGGGAAAGGTTTTAGTGAAATTCCAAGTCATTACATTGTGAATAGATGGACAAAGTTGGCAACAAGTAAACCAATTTTTGATTGTGATGGAAATGTTTTGGAGGCATGTTCTAAATTTGAAAGTGAGAGCACATTAGTTTCAAAAACATGGTCACAATTGTTGAAATGCATGCATATGGCTGGTACAAACAAAGAGAAATTGCTCCTCATTTACGATGAGGGTTGTAGTATTGAATTAAAAATGTCTAAAATGAAGACTGATGTTGTATCAAGACCTTTAGATGAATTGGAGGCTTTTATTGGTTCCAATGTTGCTAAAACAATTGAAGTTCTTCCACCTGAACCTTCAAATACCAAAGGTTGTGGAAAACGCATCAAAGGGGGGAAAGAGAAGGCAATGGAACAACAACAAAAGAGAACGAGGCTTTGTAAAGCTTGCAAGCAATATGCATCCCATGATAGTCGCAATTGTCCCACAAAATCCTCTTGA 2238 0.3534 MELDDNEVDFSSPSKDGNDPKNTSVEWIPACEDELKPVIGKVFDTLVEGGDFYKAYAYVAGFSVRNSIKTKDKDGVKWKYFLCSKEGFKEEKKVDKPQLLIAENSLSKSRKRKLTREGCKARLVLKRTIDGKYEVSNFYEGHSHGLVSPSKRQFLRSARNVTSVHKNILFSCNRANVGTSKSYQIMKEQVGSYENIGCTQRDLQNYSRNLKELIKDSDADMFIDNFRRKREINPSFFYDYEADNEGKLKHVFWADGICRKNYSLFGDVVSFDTTYRTNKYFMIFAPFTGINHHRQSITFGAALLKNEKEESFVWLFETFLKAMGGHKPVMIITDQDGGMKNAIGAVLKGSSHRFCMWHILKKLSEKVGSSMDENSGFNDRFKSCVWNSESSEEFDLEWNNIISDYSLEGNGWLSTMYDLRSMWIPAYFKDTFMAGILRTTSRSESENSFFGNYLNHNLTLVEFWVRFDSALAAQRHKELFADNNTLHSNPELNMHMNLEKHAREVYTHENFYIFQKELWSACVDCGIEGTKEEGENLSFSILDNAVRKHREVVYCLSNNIAHCSCKMFESEGIPCRHILFILKGKGFSEIPSHYIVNRWTKLATSKPIFDCDGNVLEACSKFESESTLVSKTWSQLLKCMHMAGTNKEKLLLIYDEGCSIELKMSKMKTDVVSRPLDELEAFIGSNVAKTIEVLPPEPSNTKGCGKRIKGGKEKAMEQQQKRTRLCKACKQYASHDSRNCPTKSS* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0212 745 Coils Coil 196 216 - -
Mtr2g0212 745 Pfam MULE transposase domain 268 362 IPR018289 -
Mtr2g0212 745 Pfam SWIM zinc finger 557 581 IPR007527 GO:0008270
Mtr2g0212 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 209 626 - -
Mtr2g0212 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 28 164 - -
Mtr2g0212 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 209 626 IPR031052 GO:0006355
Mtr2g0212 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 164 IPR031052 GO:0006355
Mtr2g0212 745 SMART 26again6 561 588 IPR006564 GO:0008270
Mtr2g0212 745 Pfam FAR1 DNA-binding domain 51 147 IPR004330 -
Mtr2g0212 745 ProSiteProfiles Zinc finger SWIM-type profile. 554 586 IPR007527 GO:0008270
Mtr2g0212 745 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0212 Mtr-Chr2 2211463 2213700 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g0212 FAR1 1.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0212 - - soe:110798711 799.275