Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0202 ATGGCAACTTCTCATTTTTCAACACAATCTAATCCCCTGGTTCCAAATCTCATCGGAGGCAAATTCATTGAGTCAAAATCACTGACTTTCATTGATGTTATAAACCCTGCCACACAAGAAGTTCTTTCACAAGTTCCTTTGACTACAAATGAAGAGTTTAAAGCTGCAGTGGCTGCAGCAAAGAAGGCATTTCCATCATGGCGTAACACTCCAATCACGAAACGCCAACGTGTTATGTTGAAGTTCCAAGAGCTTATACGCAGAGATATGGATAAACTAGCCCTTAATGTGACCACCGAACAAGGAAAGACGTTAAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACACTACAGATGGGAGAGTATGTTTCCAATGTATCACATGGAATTGATACTTTCAGCATTAGAGAACCACTTGGTGTTTGTGCCGGCATCTGTCCTTTTAACTTTCCTGCAATGATTCCCCTGTGGATGTTCCCAGTGGCAGTTACATGTGGCAATACCTTCATCCTAAAACCATCAGAGAAAGATCCAGGTGCTTCTATGCTTCTTTCACAATTGGCAATGGAAGCTGGTTTGCCAGAGGGTGTCTTAAACATAGTTCATGGTGCCCATGATACTGTGAATGCCATTTGTGATCATGATGATATCAAAGCTATATCTTTCGTTGGTTCAAATGTTGCTGGAATGCACATATATGCAAGAGCAGCCGCTAAAGGCAAGCGTGTTCAGTCTAACATGGGGGCCAAAAATCATGCGGTTGTCATGCCGGATGCAAGTGTTGATGCTACTATAAATGCTTTAATTGCTGCAGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTAAGTACAGTTGTTTTTGTTGGAGGCTCAAAACCATGGGAAAGTATACTTGTGGAACGTGCCAAAGCTCTTAAAGTAAATGCTGGAACCGAAGCTGATGCAGACCTTGGTCCAGTCATTAGCATACAGGCAAAGGAGCGAATACACAGATTAATTCAATCTGGATTTGAAAGTGGGGCCAGACTATTGCTCGATGGAAGAAGTATAGTGGTCCCCGGATATGAATCTGGCAACTTTATTGGCCCAACCATCTTAGCAGATGTTCGTTCCGACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTCCTCACGGAGGCTGATAGCTTGGAAGAAGCCATAAGCTTTGTCAATGAAAACAAGTATGGAAATGGTGCTACTATATTTACTAGATCTGGCGTAGCTGCAAGGAAATTTCAGACCGAAATCGAGGCAGGGCAGGTGGGCATCAATGTTCCTATTCCTGTTCCATTACCCTTTTTCTCCTTTACTGGCAACAAGGCATCATTTGCAGGCGATCTCAATTTCTACGGCAAAGCAGGGGTTAACTTTTATACACAAATCAAAACTATAACCCAGAACTGGAAGGATTCAGATAGTGACGACAAGATTAACATGGCCATGCCAACTTCTCAAAAATCTTAA 1530 0.4301 MATSHFSTQSNPLVPNLIGGKFIESKSLTFIDVINPATQEVLSQVPLTTNEEFKAAVAAAKKAFPSWRNTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASMLLSQLAMEAGLPEGVLNIVHGAHDTVNAICDHDDIKAISFVGSNVAGMHIYARAAAKGKRVQSNMGAKNHAVVMPDASVDATINALIAAGFGAAGQRCMALSTVVFVGGSKPWESILVERAKALKVNAGTEADADLGPVISIQAKERIHRLIQSGFESGARLLLDGRSIVVPGYESGNFIGPTILADVRSDMECYKEEIFGPVLLLTEADSLEEAISFVNENKYGNGATIFTRSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQNWKDSDSDDKINMAMPTSQKS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0202 509 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 467 IPR016162 GO:0016491
Mtr2g0202 509 CDD ALDH_F6_MMSDH 14 490 IPR010061 GO:0004491
Mtr2g0202 509 Pfam Aldehyde dehydrogenase family 22 486 IPR015590 GO:0016491
Mtr2g0202 509 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 1 509 - -
Mtr2g0202 509 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 259 459 IPR016163 GO:0016620
Mtr2g0202 509 SUPERFAMILY ALDH-like 8 492 IPR016161 GO:0016491
Mtr2g0202 509 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 509 IPR010061 GO:0004491
Mtr2g0202 509 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 16 490 IPR010061 GO:0004491
Mtr2g0202 509 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 284 295 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0202 Mtr-Chr2 2077525 2083811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0202 9 474 Aldehyde Dehydrogenase Gene Family AT2G14170 82.189 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0202 K00140 - gmx:100783569 897.886