Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0199 ATGCACATGGCTGTGGCCTCAAATCAGTTGCTGCAGCTGGTAGTTTTTGCGGTCTTTTTTGCAAAAGCAACAACTCAGCAACTATCTCTCCCAAACTGCACAACAAAGTGTGGCTCTGTCACAATTCCCTTTCCATTTGGAACCACCAAGGATTGTTCCTTGGACAACACTTTTCTCATAAATTGCACCAAAGCATCTTCTTCTTCTTCTTCAACCTCAACCCATATACCTTTCCTGCCACATACTAATCAAACTGTCCTAAACATCTCGCTTGATGGTGAACTGCGTGTTGCATGGCCAGTAGCCAGCGATTGCTACGACGAAAAGAGCATACAGGTGAACCAATCATTTTGGGGTATCAGAATGACACATTTTCCCGTCTCATCAACACGAAACAAGTTTGTTGCCGTTGGCTGTGACACGATTGCAATACTCGCAGCATTTGATTTTGGGGGAAACAACTACACCACGGGATGTTTGGCTTTGTGCAACAGGTTTAATGATATCGTGGCCAATGAATCTTGCTCCGGCACTGGTTGTTGTCAGATTTCAATACCGCAAGGTCATTTGTTCGAGAAAGTGTCCTTTGTTACTGTAGGTGCATTCAACAATCACTCAGCAGTACATGACTTCAATCCTTGTGGTTATGCTTTTTTTGTTGAAAATGGAGCCTACACTTTCGAATCCACGGACCTCCTCAAGTTGGAGAAGAAGGAATTTCCTGTGTTGTTGGACTGGGCAGTAGGGAACCAAACGTGCCAGCAAGCTCAGAAGGATCTTGCAAATTATGCCTGTAAGGACAACAAAAGTACATGTTACAATCCACCTGAGAAATCTGGTTACCTTTGCAGATGCCTTCATGGATATAGGGGAAATCCTTACCTCATTCATGGTTGCCAAGATATTAATGAATGTATGGAGTCCAATGACTGTGTTGAGGAAGCAACATGCACCAATCTTCCTGGAAGCTACCAGTGTTTATGTCCGGCAGAATATGAGGGAAACGGGAAGATGAATGGAACAAAATGCAGTCCAAAATCCAATACCAAATCAAGAAAAGAGATCATAATGATCATTGCAATGAGTGTCAGCATGAGCCTTGTAGCACTACTGGTTGGAAGCTTTTATGCGTATTTGGCATTAAAGAAAAGAAAGCTCATTAAACTGAAAGAACAATTTTTTCAACAAAATGGTGGCTTACTACTACAACAAGAAGTAGTGAGGCACGGAGGGTCAACTGAAACAACTAAAGTCTTCACTGTTGAGGAGCTAAATGAAGCAACCAACAACTTCGACGAAGGCAAGATTCTAGGCCAAGGAGGTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCTATTAAGAAGTCCAAAATCAGTGACCCTAACCAGATTGAGCCGTTCATCAATGAAGTGATTGTGCTTTCACAAATCAACCATAGAAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTACTTGTTTACGAATTCATTCCCAATGGTACTGTTTATGAGCATCTTCATGATCAAAATCCAACTTTAAAGCTTACATGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCCTAGCATACTTGCATTCTGCTGCATCTACACCAATCATACATAGAGATGTGAAATCTTCAAACATACTCCTAGATCGCAATCTCACGGCAAAGGTTTCTGACTTTGGAGCTTCTAGGATTGTTCCTCTTGACCATAGTCAGATAAAAACCCTAGTACAAGGGACATGGGGGTACCTTGACCCGGAATATTTCCACACAAGCCAATTGACAGAGAAGAGTGACGTCTATAGCTTTGGAGTTGTACTAGCAGAGCTACTGGCAGGAAAGAAGGCACTATCTTTTAGCAGGCCAGAGTTGGATAGAAACCTTGCATTGTACTTTGTTTCTTCAATGAAAGATGGTCAGTTACTTCATATTTTGGACAAAAATATTGACGAGGCGAACATTGAGCAACTAAAGGAGGTTGCCCTTATTGCAGAAAGGTGTTTACGGGTGAAGGGTGAGGAAAGACCCACCATGAAAGAAGTGGCAGCGGAACTGGAGGGAATATTAGTTATTGAAGAGCACCGTTGGGGAAGTGGAAATCAGTCTTCAGAAGAAACTGATACATTGCTCAGAACAACATCACCTATCATTGTTACAGATGGTGGCAATAATTATTCTTCTGAATCATACAGCATAAACCAGATTACAATGTCATTTGTTGGTGGAAGATGA 2277 0.4159 MHMAVASNQLLQLVVFAVFFAKATTQQLSLPNCTTKCGSVTIPFPFGTTKDCSLDNTFLINCTKASSSSSSTSTHIPFLPHTNQTVLNISLDGELRVAWPVASDCYDEKSIQVNQSFWGIRMTHFPVSSTRNKFVAVGCDTIAILAAFDFGGNNYTTGCLALCNRFNDIVANESCSGTGCCQISIPQGHLFEKVSFVTVGAFNNHSAVHDFNPCGYAFFVENGAYTFESTDLLKLEKKEFPVLLDWAVGNQTCQQAQKDLANYACKDNKSTCYNPPEKSGYLCRCLHGYRGNPYLIHGCQDINECMESNDCVEEATCTNLPGSYQCLCPAEYEGNGKMNGTKCSPKSNTKSRKEIIMIIAMSVSMSLVALLVGSFYAYLALKKRKLIKLKEQFFQQNGGLLLQQEVVRHGGSTETTKVFTVEELNEATNNFDEGKILGQGGQGTVYKGVLQDKRIVAIKKSKISDPNQIEPFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTVYEHLHDQNPTLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSSNILLDRNLTAKVSDFGASRIVPLDHSQIKTLVQGTWGYLDPEYFHTSQLTEKSDVYSFGVVLAELLAGKKALSFSRPELDRNLALYFVSSMKDGQLLHILDKNIDEANIEQLKEVALIAERCLRVKGEERPTMKEVAAELEGILVIEEHRWGSGNQSSEETDTLLRTTSPIIVTDGGNNYSSESYSINQITMSFVGGR* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0199 758 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247
Mtr2g0199 758 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 14 736 - -
Mtr2g0199 758 Gene3D Phosphorylase Kinase; domain 1 400 506 - -
Mtr2g0199 758 Pfam Wall-associated kinase 172 274 IPR013695 GO:0004674|GO:0016021
Mtr2g0199 758 Gene3D Transferase(Phosphotransferase) domain 1 507 722 - -
Mtr2g0199 758 SUPERFAMILY EGF/Laminin 300 336 - -
Mtr2g0199 758 SMART egfca_6 301 344 IPR001881 GO:0005509
Mtr2g0199 758 Pfam Protein kinase domain 432 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0199 758 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 736 IPR045274 GO:0007166
Mtr2g0199 758 SMART serkin_6 431 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0199 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Mtr2g0199 758 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Mtr2g0199 758 ProSiteProfiles EGF-like domain profile. 301 344 IPR000742 -
Mtr2g0199 758 SUPERFAMILY Protein kinase-like (PK-like) 413 701 IPR011009 -
Mtr2g0199 758 CDD EGF_CA 301 334 - -
Mtr2g0199 758 CDD STKc_IRAK 437 703 - -
Mtr2g0199 758 ProSiteProfiles Protein kinase domain profile. 431 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0199 758 Pfam Calcium-binding EGF domain 301 343 IPR001881 GO:0005509
Mtr2g0199 758 ProSitePatterns Calcium-binding EGF-like domain signature. 301 326 IPR018097 GO:0005509
Mtr2g0199 758 SMART egf_5 304 344 IPR000742 -
Mtr2g0199 758 SMART egf_5 252 300 IPR000742 -
Mtr2g0199 758 Gene3D Laminin 250 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0199 Mtr-Chr2 2023665 2027072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0199 13 725 Receptor kinase-like Gene Family AT1G21230 47.383 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr2g0199 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0199 - - mtr:MTR_3g088780 1019.61