Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0182 ATGGGGTTGCAATTGCATCATAGGAAATTGATGGCAAAATTATGTGAAACAATATGTCACACAAATTGTTCATCAGGCAAAAATTGCACTGCTTGCTTCAATTTCTGTATAACCAGTCCAAAAATCCCTTATTACTATCCTCCATCACCACCACCACCACAACAAGATCACCACAAAATCAACAATTACTTCATCCTCACGCTTTCTCTTCTTGCTTTTGCTTTTTTTCTTGTTTGTATTCGTGCAATTTACGTCAGTTTCAGGTCAAGAAGAAGAAGAAGCAGCTTACGGGCACAACCATCATCAACAACTCAACAAAATGATAGGAATTTTGATGATGAAGAACAACAGCATCAACATGGATCTGTGGTGGATCATCCTATTTGGTATATTCGAACCTTAGGTCTTCATCAATCTGTTATCAATGCAATTAGTGTTTGTAAGTATAAGAGAGGTGAAGGTTTGATTGAAGGAACTGAATGTTCTGTATGTTTGAGTGAGTTTGAAGAAGATGAGAATCTTAGACTTTTACCTAAGTGTCATCATGCTTTTCATTTACTTTGTATTGATACTTGGCTTAGGTCGCATACCAATTGTCCTATGTGTAGGGCTCCAATTGTTAATAACCCTACAGTTGCTAGGGTTGAGTCTTTGGAGTCTGTTATTGTTGTTGATGATTCCAGTTCAAGTTCATTGGAACATACACAAATTGATGTTTTTGATGAAAATAGTGGTGAAAGTGAAACCAATTTAGGGTTTGAAAATAGTGCTTTTGACTCTGAATCGAGGAATTGGGAAGAAAATGATGGAGGGCAGTCCGAGGTATGTGAAAATGAAAGGCAAGTTGTCGATGTGGTTAGCATCGTTCGGCCTAGGAGATCAGTTTCTATGGACAATTTTGCTTTTGCAACTGTTCTATCAATTGAGTCTAATGGTAATGGTGATTCAAGTAAAATGAGTTTCAATGATGATGCTATTTCAAAGGTTAATGGAAACGAGAATTTGGCAACTACTTCCAAAGGCAGCAGTAGCTTTTCTTTTAGGCCAACAAGATATTTGCAGGGTGTTCCTAGTCCAATGAAGAGGTCAAGTTCGTACAATGGGAAATTTCTTCTGTCTTGGTTTAGCAGCAATCAGAAGAAGCCAAATGATATTTTCAGAAACTTATGA 1170 0.3726 MGLQLHHRKLMAKLCETICHTNCSSGKNCTACFNFCITSPKIPYYYPPSPPPPQQDHHKINNYFILTLSLLAFAFFLVCIRAIYVSFRSRRRRSSLRAQPSSTTQQNDRNFDDEEQQHQHGSVVDHPIWYIRTLGLHQSVINAISVCKYKRGEGLIEGTECSVCLSEFEEDENLRLLPKCHHAFHLLCIDTWLRSHTNCPMCRAPIVNNPTVARVESLESVIVVDDSSSSSLEHTQIDVFDENSGESETNLGFENSAFDSESRNWEENDGGQSEVCENERQVVDVVSIVRPRRSVSMDNFAFATVLSIESNGNGDSSKMSFNDDAISKVNGNENLATTSKGSSSFSFRPTRYLQGVPSPMKRSSSYNGKFLLSWFSSNQKKPNDIFRNL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0182 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 211 IPR013083 -
Mtr2g0182 389 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 380 - -
Mtr2g0182 389 Pfam Ring finger domain 160 203 IPR001841 -
Mtr2g0182 389 SUPERFAMILY RING/U-box 155 209 - -
Mtr2g0182 389 CDD RING-H2_PA-TM-RING 160 203 - -
Mtr2g0182 389 ProSiteProfiles Zinc finger RING-type profile. 161 203 IPR001841 -
Mtr2g0182 389 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 380 IPR044675 -
Mtr2g0182 389 SMART ring_2 161 202 IPR001841 -
Mtr2g0182 389 MobiDBLite consensus disorder prediction 95 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0182 Mtr-Chr2 1875546 1877183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0182 7 280 C3H Transcription Factor Family AT1G72220 37.624 1.81e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0182 - - lja:Lj6g3v2193690.1 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0182 2 1875546 1877183 Mtr2g0182 2 1875546 1877183 ECH