Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0178 ATGGCAGTGTATTTGATAAGGTCTTGTTCTTGGCTTCTGATTGTGTTAACTCTCTTTATACATGCAGATTGTGGTGACATTGTAAAAACTCTTCCTGGCTTTCCTGGTGAACTTCCATTCACACTTGAAACGGGTTACATAGGGGTGGAACATTCTGAACTATTCTATCTTTTTGTTGAGTCAACTGGGAATCCAAAAACTGATCCTCTTCTTCTATACTTAATTGGAGGTCCTGGCTGTTCTGCTTTAAATGCATTTTTCTTTCAAGTTGGTCCATTAGCTTTCAATGAGGCTGATTATACAGGGGGATTACCACAATTAATCCTAAGGTCTTACCCATGGACAAAAAGTGCTAGCATTATATTTCTAGATGCACCAGTTGGTACTGGATACTCATATTCTACATCCCCTGAAAGTTTGGTTCCATCCGACTCAATGTCAGCAAGACAAACGTACAAATTCTTGAGACAGTGGTTGATGGAACACCCTCAATATCTTCTGAATCCAGTGTTAATTGTCGGTGATTCATATAGCGGTATGCTTGCACCAATAATTTCGAAGCATATATTAGATGGAAATGCAGCTGGACCAAAGCCATACATAACTTTAATAGGAATGATAGGTGGATCTCCTGTTACAAGTATAGCACTGGAAAATAATACAAAAATAATCATGGCTCACCGATTGACACTTATATCAGACAGTCTCTATGAGGAAGCCAAGGAGAGCTGTGAAGGATGGTATATTGATGTAAACCCTTCAAACACTAAATGTGTGAAAGCACTTCAAGAGATTGATGAGTTGCTGACTGATATTAATGTTGCAAATGTTCTGGATCCCAATTGTGAAAGACTATCACCAAAACCAAATGATACACGATCTAGAAGAGTTCTCAAAGGAAAGGAAACAAATTTCCAATGGCAGTTCCAAAAGCAACACCATCAGAAATGGTGGTGCAAGAGTTATGTTTATCTGCTTTCTTATATATGGGCGAACGATGAGAAAGTTCAAGAAGCACTTCATGTTAGAGAGGGAAGAGTAAAAGAATGGTAA 1053 0.3846 MAVYLIRSCSWLLIVLTLFIHADCGDIVKTLPGFPGELPFTLETGYIGVEHSELFYLFVESTGNPKTDPLLLYLIGGPGCSALNAFFFQVGPLAFNEADYTGGLPQLILRSYPWTKSASIIFLDAPVGTGYSYSTSPESLVPSDSMSARQTYKFLRQWLMEHPQYLLNPVLIVGDSYSGMLAPIISKHILDGNAAGPKPYITLIGMIGGSPVTSIALENNTKIIMAHRLTLISDSLYEEAKESCEGWYIDVNPSNTKCVKALQEIDELLTDINVANVLDPNCERLSPKPNDTRSRRVLKGKETNFQWQFQKQHHQKWWCKSYVYLLSYIWANDEKVQEALHVREGRVKEW* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0178 350 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 350 IPR001563 GO:0004185|GO:0006508
Mtr2g0178 350 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 10 350 - -
Mtr2g0178 350 Gene3D alpha/beta hydrolase 22 350 IPR029058 -
Mtr2g0178 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Mtr2g0178 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Mtr2g0178 350 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Mtr2g0178 350 SUPERFAMILY alpha/beta-Hydrolases 28 347 IPR029058 -
Mtr2g0178 350 Pfam Serine carboxypeptidase 32 350 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0178 Mtr-Chr2 1831574 1834988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0178 21 49 Calmodulin-binding Proteins AT2G22960 72.414 3.75e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0178 K16296 - rcu:8276886 381.719