Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0162 ATGGCTGAACCTCCTTCTTTTGGTTTAGGTCCTCGATTAGACATTCAGCAATTACAATTTGAAGCCCAACATCGGTGGTTGCGACCGGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCATATCACACCAGAACCTCATACAAGGCCACCGAGTGGTTCACTTTTTCTTTTTGACCGAAAGGTTTTGAGATACTTTAGAAAGGACGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTCATGAAAAATTAAAGGTGGGAAGTGTTGATGCGTTACACTGCTACTATGCACATGGAGAAGAAAACGAAAATTTTCAAAGGCGAAGCTATTGGTTGCTTGAACAGGATACACACATAGTATTTGTCCATTACTTGGAAGTTAAGAGTAACAAGTCAAATATTGGAGGAAACGCTGATAGCAATGAGGTCATATCAGATTCTCAAAAGGTCAACTCTCCGTCGTCTGGCATTCCCGCAACTTATAGTAGTGTGCCTTCTCTAAGTACAGATTCCATGAGCCCAACTAGTAGCTATACATCTTTACGTGAAGATGCTGATTCAGGTGATCATGGACAGTCATCAGTTTCTGGAATGGATTATATCCCACCTTTTAGCAGGGATACATTTAGAGGAAATGGTGCTACTTGCATTGATGGCCAGGCATCATGGGACACGGTCTTGCAATCCACCGCTGAGTTGCATGCTGATCCTTCTCTTGTATCTTTTACTTCCATCCCATCTGGTTCACTGTCAAACATCCTTGACCAAGAAGATAACATCTTGGGTGACTTTTCAATGAGCAGAAGTGGCCTCGCTATTGGAGCAGGGAGTTCTCAGCCTCTCCAATCAAATTGGCAGATTCCTTTTGAAGACAACACGGGACATATGCCAACCTTTACCCAATCATTGAGTTTGGAATTTGCATCTGATTATGGAACTGGTTTACTAGGGAACGAATCTGATAATGGAAGTTCTATAATTGATCCTGTCTTGTTTAGTTTTCATGGTGAGCCAAAAGAGAAGCTTGCACAGCAAAACTATTTGGAAGAGAAGGTAGATGGACACCCGCGAGATGACCTTAAGTCTAATTCCACAAAAGAAGTTCCTAGTGAAGAAACTATTAATTATCCCTTACCTGTGAGACGCACATTATTGGATAGGGATGAGAGCTTGAGGAAGGTTGATAGCTTCAATCGGTGGATTACTAAAGCCCTTGGAGAGGTGGACGATTTGAATATGCAATCCTCACCTGGTATTTCATGGAGTGCAGATGATTGTGGGCATGTGATAGATGATACCTCCCTGAGCCCATCTCTGTCTCAGGATCAGCTGTATAGCATAACTGATTTTTCACCTAAATGGGCTTATGCTGAGTCAGACACTGAGGTGTTGATTATTGGATCCTTTTTGAAAAGTCAACCAGATGTTACAGCCTGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTGTAGCTAATGGAATTCTGTGTTGTCAAGCTCCTCCTCACAAGGTTGGGCGGGTCCCTTTCTATGTAACATGTGCCAATAGGTTAGCTTGCAGTGAAGTGCGTGAATTTGATTTCAGAGACGGCTATTCCAGAAATGTAGATTATACAGATTTTTTCAACAGTTCGAATGACATGCTACTTCATTTGCGGCTGGAGGAGTTTCTTTCTTTGAAACCAGTGCACCCTTCAAATCAAACCTTTGAAGGCGATACAGAGAAAAGGAGCTTAATTCTTAAGCTTATTTCACTGAGAGAGGAAGAAGAATATTCAAGTAAGGAAGAGCAGACTGTAGAGATGGATATATCACGACACAAGGTGAAGAAGCATCTGTTTCATAGGCAGTTTAAAGAGAAACTGTACTCATGGCTTCTTCACAAGGTAACTGAGAGTGGTAAAGGGCCAAATGTGTTAGATAAGGACGGGCAGGGCGTGCTACATTTAGCAGCCGGTCTTGGTTATGACTGGGCAATAATCCTAATTTTAGCTGCTGGAGTTAATATCAACTTCCGTGATGTGAATGGTTGGACGGCCTTACATTGGGCGGCATCCTGTGGCAGAGAGCGGACAGTTGGTGCCCTTGTACATATGGGTGCAGATTGTGGAGCATTGACGGATCCATCTCCAGAATTTCCTTCAGGCAGAACAGCTGCAGATCTCGCCTCTAGCAATGGGAACAAAGGACTCTCTGGTTTTCTAGCAGAGTCTTCGTTAACCAGCCACCTTGAATCCCTCACAGTGGATGATCTACACAAAGGTGGTCAGCAAGAAGTTTCAAGAACAAAAGCAGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGATCTATAATGATATGCCTGATGCCCTATGCCTTAAAGATTCTCTAACCGCTGTCCGTAATGCGACTCAAGCTGCCGATCGCATACATCAAGTATTCAGAATGCAGTCCTTTCAGAGGAAGCAGTTAACTCAGGATGAGGATGATGATGATGAATTTGGTTTGTTAGATCAGCGGGCTCTTTCTCTTCTAGCTTCTAAGGCACGCAAGTCAGGACAAGGAGATGGCCTAGTCAATGCTGCTGCAACTCAAATACAGAAAAAGTTCCGTGGTTGGAAGAAGAGAAAAGAATTCTTGCTCATTCGTCAAAGAATTGTGAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGTATAAAACTGTCATCTGGTCTGTGGGAATCCTGGAGAAGATTATATTACGCTGGAGACGCAAGGGTAGTGGTCTACGTGGGTTTCGACCAGAAGCCCTTAATAAAGCCCCCAGTCAACAAAATGATTCTCTGAAAGAGGATGATTACGATTATTTAAAGGAAGGACGAAAACAAAAAGAGGAAAAGATCCAAAAGGCCCTTTCTAGGGTGAAGTCCATGGTTCAGTATCCGGAGGCGCGGGCTCAATACCGGCGGGTGCTAAATGTTGTTGAAGACTTCCGTCAAAAGAAGGATTGTAATATGGGGATGAGTTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTTTTAGATGATGAAAATTTCAACCCTATAGCATTTGATTGA 3123 0.4297 MAEPPSFGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITPEPHTRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEENENFQRRSYWLLEQDTHIVFVHYLEVKSNKSNIGGNADSNEVISDSQKVNSPSSGIPATYSSVPSLSTDSMSPTSSYTSLREDADSGDHGQSSVSGMDYIPPFSRDTFRGNGATCIDGQASWDTVLQSTAELHADPSLVSFTSIPSGSLSNILDQEDNILGDFSMSRSGLAIGAGSSQPLQSNWQIPFEDNTGHMPTFTQSLSLEFASDYGTGLLGNESDNGSSIIDPVLFSFHGEPKEKLAQQNYLEEKVDGHPRDDLKSNSTKEVPSEETINYPLPVRRTLLDRDESLRKVDSFNRWITKALGEVDDLNMQSSPGISWSADDCGHVIDDTSLSPSLSQDQLYSITDFSPKWAYAESDTEVLIIGSFLKSQPDVTACNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCANRLACSEVREFDFRDGYSRNVDYTDFFNSSNDMLLHLRLEEFLSLKPVHPSNQTFEGDTEKRSLILKLISLREEEEYSSKEEQTVEMDISRHKVKKHLFHRQFKEKLYSWLLHKVTESGKGPNVLDKDGQGVLHLAAGLGYDWAIILILAAGVNINFRDVNGWTALHWAASCGRERTVGALVHMGADCGALTDPSPEFPSGRTAADLASSNGNKGLSGFLAESSLTSHLESLTVDDLHKGGQQEVSRTKAVQTVSERTATPVIYNDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTQDEDDDDEFGLLDQRALSLLASKARKSGQGDGLVNAAATQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYKTVIWSVGILEKIILRWRRKGSGLRGFRPEALNKAPSQQNDSLKEDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDCNMGMSSEETVDGVEDLIDIDMLLDDENFNPIAFD* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0162 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 915 IPR027417 -
Mtr2g0162 1040 MobiDBLite consensus disorder prediction 142 189 - -
Mtr2g0162 1040 ProSiteProfiles IQ motif profile. 866 894 IPR000048 GO:0005515
Mtr2g0162 1040 ProSiteProfiles CG-1 DNA-binding domain profile. 15 140 IPR005559 GO:0003677
Mtr2g0162 1040 SMART iq_5 864 886 IPR000048 GO:0005515
Mtr2g0162 1040 SMART iq_5 887 909 IPR000048 GO:0005515
Mtr2g0162 1040 ProSiteProfiles Ankyrin repeat profile. 654 686 IPR002110 GO:0005515
Mtr2g0162 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 201 - -
Mtr2g0162 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 194 1040 - -
Mtr2g0162 1040 Pfam Ankyrin repeats (3 copies) 636 715 IPR002110 GO:0005515
Mtr2g0162 1040 ProSiteProfiles IQ motif profile. 888 912 IPR000048 GO:0005515
Mtr2g0162 1040 Gene3D - 865 911 - -
Mtr2g0162 1040 MobiDBLite consensus disorder prediction 142 206 - -
Mtr2g0162 1040 ProSiteProfiles Ankyrin repeat profile. 687 719 IPR002110 GO:0005515
Mtr2g0162 1040 Gene3D - 623 812 IPR036770 -
Mtr2g0162 1040 MobiDBLite consensus disorder prediction 358 378 - -
Mtr2g0162 1040 Gene3D Immunoglobulins 447 542 IPR013783 -
Mtr2g0162 1040 SUPERFAMILY E set domains 454 539 IPR014756 -
Mtr2g0162 1040 SUPERFAMILY Ankyrin repeat 630 748 IPR036770 -
Mtr2g0162 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 194 1040 - -
Mtr2g0162 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 201 - -
Mtr2g0162 1040 SMART CG_1_2 18 135 IPR005559 GO:0003677
Mtr2g0162 1040 SMART ANK_2a 654 683 IPR002110 GO:0005515
Mtr2g0162 1040 SMART ANK_2a 687 716 IPR002110 GO:0005515
Mtr2g0162 1040 SMART ANK_2a 726 755 IPR002110 GO:0005515
Mtr2g0162 1040 ProSiteProfiles Ankyrin repeat region circular profile. 687 713 - -
Mtr2g0162 1040 Pfam CG-1 domain 21 133 IPR005559 GO:0003677
Mtr2g0162 1040 CDD IPT 453 541 - -
Mtr2g0162 1040 Pfam IPT/TIG domain 453 528 IPR002909 -
Mtr2g0162 1040 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Mtr2g0162 1040 Pfam IQ calmodulin-binding motif 867 885 IPR000048 GO:0005515
Mtr2g0162 1040 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0162 Mtr-Chr2 1655858 1669217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0162 1 1004 CAMTA Transcription Factor Family AT5G64220 52.478 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mtr2g0162 CG-1 4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0162 K21596 - gmx:100818124 1584.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3191 4 45360834 45369712 Mtr2g0162 2 1655858 1669217 PCT