Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0157 ATGATGAGGTTTCCCCTTTTTGTTCCTCAACTTATTACTTTTTCAGTTCTTGCAATGGCTCAAGAAGGACCTAAAGGGGATAATGAAGTCCAAAATAAATCTTCGGACGATAAAAACAACAACAATTCCAATCTTTTATTATTAATACTCAACGTTGTTCTTCTTCTTGCAATTATATTGCTATTGATTCTTTACTATAACACATCAAAAAAGCTCAATAGAATAGTCAAAGGACACATTAACACATTTCATGAACAAGAGAAAGATGTTGAAACAAGTATTGAGAAGAGGATAGAGATAGGAGAAGGAACAACAATGATGACAGTAGAAGAGAGAAAGGAGTTAATGTTCTTTAAAGATGAGACAAAATTTCAAATGGGAGAACTTCTTAGAGCTTCTGCTGAGGCATTAGGTCATGGAATTATGGGAAATAGTTATAAGGCAATGTTGAATAATGGACCTACCATTGTTGTAAAGAGGTTAAGGGACTTGAAACCATTCACTAAGGAGGAATTTGCAAAGATAGTGAAAATGATTGCTGATCTTAGACACCCTAATTTATTGCCTTTGCTTGCTTACTATCATTCCAGAGAGGAGAGGCTAATGCTCTATAGATATGCACAGAATGGAAACCTTTTCTCACGACTTCATGATGGAAGGGATGGAAACAGGGTTCCATTCAATTGGAACTCAAGATTATCAGTGGCAAGAGGCGTGGCTCGAGCACTAGAGTACCTTCACCTTAACAACAAGTTCCATAACATTGTCCCTCATGGAAATTTGAAGTCTTCAAATGTACTATTTGATGAAAATGATTCAGTTCTTGTATCTGACTTCAGCCTTGCCTCGTTAATAGCACAACCAATTGCAGCTCAACATATGGTTGTTTACAAATCACCTGAATATGGTTATGCAAAAAAAGTTACAATGCAATCAGATGTTTGGAGTTACGGATCACTTTTAATAGAACTTGTAACTGGGAAAGTTTCTATGTGCTCAGCTCCACAAGGGACTAATGGTGTGGATCTTTGTAGTTGGGTTCATAGAGCTGTGAGAGAAGAATGGACTGCAGAGATATTTGACAAAGAAATATCTTGTCAAAAGAGTGCTCTTCCTGGGATGTTAAGGTTGTTGCAGGTAGCAATGAGATGTATTGAGAGGTTCCCAGAGAAACGTCCTGAGATGAAAGAGGTAGTTAGAGAAGTGGAGAAAATACAACAGGTACACTTGATGTCCGAAGACGAGGATGATGTTTCTTGTGATCAGTCTCTAACTGATGATTCCTTTTCAACTAGTAACTCAGGGATTTTTGTTGAAAGATAG 1323 0.3726 MMRFPLFVPQLITFSVLAMAQEGPKGDNEVQNKSSDDKNNNNSNLLLLILNVVLLLAIILLLILYYNTSKKLNRIVKGHINTFHEQEKDVETSIEKRIEIGEGTTMMTVEERKELMFFKDETKFQMGELLRASAEALGHGIMGNSYKAMLNNGPTIVVKRLRDLKPFTKEEFAKIVKMIADLRHPNLLPLLAYYHSREERLMLYRYAQNGNLFSRLHDGRDGNRVPFNWNSRLSVARGVARALEYLHLNNKFHNIVPHGNLKSSNVLFDENDSVLVSDFSLASLIAQPIAAQHMVVYKSPEYGYAKKVTMQSDVWSYGSLLIELVTGKVSMCSAPQGTNGVDLCSWVHRAVREEWTAEIFDKEISCQKSALPGMLRLLQVAMRCIERFPEKRPEMKEVVREVEKIQQVHLMSEDEDDVSCDQSLTDDSFSTSNSGIFVER* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0157 440 ProSiteProfiles Protein kinase domain profile. 131 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0157 440 Pfam Protein tyrosine and serine/threonine kinase 135 401 IPR001245 GO:0004672|GO:0006468
Mtr2g0157 440 Gene3D Phosphorylase Kinase; domain 1 99 206 - -
Mtr2g0157 440 PANTHER RECEPTOR-LIKE KINASE 26 437 - -
Mtr2g0157 440 SUPERFAMILY Protein kinase-like (PK-like) 135 409 IPR011009 -
Mtr2g0157 440 MobiDBLite consensus disorder prediction 423 440 - -
Mtr2g0157 440 Gene3D Transferase(Phosphotransferase) domain 1 207 428 - -
Mtr2g0157 440 PANTHER OS05G0588300 PROTEIN 26 437 - -
Mtr2g0157 440 MobiDBLite consensus disorder prediction 418 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0157 Mtr-Chr2 1603282 1605498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0157 95 417 Receptor kinase-like Gene Family AT2G36570 39.474 5.78e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr2g0157 PK_Tyr_Ser-Thr 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0157 - - mtr:MTR_2g008740 785.023