Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0152 ATGGCAGCTGCAACATCTGGTGCTGTGTTGAATGGTTTGGGATCTTCCTTCTTATCTGGAGGAAAGAGAAGCCAAACCTTGTTAGCTACTACTGCTATTGGAGCCAAAGTTGGTGTTGCAGCTGGTAGTCCTAAAAGACTTATTGTTGCTGCTGCTGCTTCTGCACCAAAGAAGTCATGGATCCCTGGTGTTAGATTTGGTGGAAACCTCGTCGACCCAGAATGGCTCGATGGATCACTACCAGGTGACTTTGGTTTTGACCCACTAGGCCTTGGCAAGGACCCAGCATTTCTGAAATGGTACAGAGAAGCTGAGCTTATTCATGGAAGGTGGGCAATGGCTGCAGTTCTAGGCATCTTTGTTGGTCAAGCATGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCATTCTCCTTTGGTACTCTTCTAGGCACTCAGTTGATTCTCATGGGGTGGGTAGAGAGCAAGAGATGGGTGGATTTCTTCAACCCGGATTCACAGTCAATCGAATGGGCTACTCCATGGTCAAAAACCGCTGAGAACTTCGCTAATGCAACCGGAGAACAAGGTTACCCAGGGGGAAAATTCTTTGATCCATTGTCCCTTGCTGGTACCATCGAAAACGGAGTTTACATTCCAGATACAGAGAAGCTAGAGAGATTGAAACTAGCTGAGATTAAGCATGCTAGGCTTGCTATGTTGGCTATGCTGATTTTCTACTTTGAAGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 786 0.4758 MAAATSGAVLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSWIPGVRFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0152 261 Gene3D Chlorophyll a/b binding protein domain 73 260 - -
Mtr2g0152 261 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 261 - -
Mtr2g0152 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 261 IPR001344 GO:0009765|GO:0016020
Mtr2g0152 261 SUPERFAMILY Chlorophyll a-b binding protein 70 261 - -
Mtr2g0152 261 Pfam Chlorophyll A-B binding protein 73 249 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0152 Mtr-Chr2 1562428 1563632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0152 1 261 Chloroplast and Mitochondria Gene Families AT1G15820 82.375 1.81e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0152 K08917 - gmx:100500118 483.411