Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0147 ATGGATGTTTTATTATCCTTAAACTCAGGCCTAATTAGCATTTCCAAACCATATCAACATCATATCCTTCCACTCTCAAGTAGACAACCTCGTATGCAGTTTTCTGTTTCATGCAGAGCTACAAAAAATGTTCCAATTCATAATGAGTTGAATGATGATGGCAACTTGTACAAGATACTATGTTTGAGTCCTAAAAGTGCAACAATGGATGACATAAAGAGAGCATATAGAACAATGGCTCTCCAGTATCATCCTGATGTTTGTCATGATCGTTTGAAGAAAGAGGAATCAACGAAGATGTTTGTACAACTCAATGCAGCTTATGAGACTTTGTCAAATCCAAAGCTTAAAGAAGAATATGACTTTGAGTTGAGTTTGGGTTTGAGAAGAAGTAGGTTGATGGAACAAATGGTTGAGTTGAATAGAAGGTCTCATACACGTATGGCTGCAGGATCATCATCATCATGGGGTAGTAGAATGAGGGCCAAAAACAATATAACCAAAGATGATCATACTAACTAG 522 0.3678 MDVLLSLNSGLISISKPYQHHILPLSSRQPRMQFSVSCRATKNVPIHNELNDDGNLYKILCLSPKSATMDDIKRAYRTMALQYHPDVCHDRLKKEESTKMFVQLNAAYETLSNPKLKEEYDFELSLGLRRSRLMEQMVELNRRSHTRMAAGSSSSWGSRMRAKNNITKDDHTN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0147 173 Gene3D DnaJ domain 44 147 IPR036869 -
Mtr2g0147 173 Pfam DnaJ domain 55 121 IPR001623 -
Mtr2g0147 173 PRINTS DnaJ domain signature 58 76 IPR001623 -
Mtr2g0147 173 PRINTS DnaJ domain signature 76 91 IPR001623 -
Mtr2g0147 173 PRINTS DnaJ domain signature 96 116 IPR001623 -
Mtr2g0147 173 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Mtr2g0147 173 SMART dnaj_3 54 116 IPR001623 -
Mtr2g0147 173 MobiDBLite consensus disorder prediction 146 162 - -
Mtr2g0147 173 CDD DnaJ 55 113 IPR001623 -
Mtr2g0147 173 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Mtr2g0147 173 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 6 168 - -
Mtr2g0147 173 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 6 168 - -
Mtr2g0147 173 SUPERFAMILY Chaperone J-domain 50 125 IPR036869 -
Mtr2g0147 173 MobiDBLite consensus disorder prediction 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0147 Mtr-Chr2 1525279 1525885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0147 57 121 C2H2 Transcription Factor Family AT1G74250 41.791 1.39e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0147 - - vun:114187063 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3206 4 45494965 45495728 Mtr2g0147 2 1525279 1525885 PCT