LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g0142	ATGGAGAGAGTGACTCCATCTTCTAATAAAGCTTCCTTTCTTTTAAGTACAACTTTGGTTCTTCATTTGCTGCTTCAAGCTTCTTCCAATGAAGAAAGTGATATGCTTATTGCATTCAAGAGCAACTTAAATGATCCTAACAATGCTCTTGAAAGTTGGGATTCTACCCTTCTCAATCCCTGCACATGGTTTCATGTTACATGCAGCGGTGATAGAGTAATCCGTGTCGATCTTGGAAATGCAAACCTTTCTGGAATACTGGTTTCAAGCCTAGGGGGTCTCTCAAATTTGCAGTACTTGGGACTTTATAATAATAATATAACAGGAACAATCCCAGAAGAGCTAGGAAATTTAACAAACTTGGGAAGCTTGGATCTTTACTTGAACAATTTAACCGGTACCATACCAAATACATTCGGCAAGCTTCAAAAACTAAGTTTCCTGCGTCTCAACAATAACAGCTTGACTGGAGTCATTCCCATTTCTTTGACAAATGTTACTACGCTGCAAGTTCTTGATGTCTCAAACAATAATCTAGAAGGGGATTTCCCGGTGAATGGTTCATTTTCAATATTTACCCCTATCAGTTATCATAATAATCCTCGCATGAAACAACAAAAAATCATTACAGTGCCACTTTCTCCATCATCACCAGCTTCTTCAGGTAGCATTAATACCGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTGTTGTTTGCTGCCCCTGCAATTGCAATTGCTTATTGGCAAAAAAGAAAACAACAGGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCGCTACGTGAGCTGCTAGTAGCAACAGATAACTTCAGCAACGAAAACATTATAGGTAAAGGCGGATTCGCAAAGGTTTATAAAGGACGCTTAGCTGATGGCACTCTTGTAGCAGTAAAAAGACTCAGAGAGGAACGCACACGTGGTGGGGAACAGGGTGGGGAGCTGCAATTTCAGACAGAAGTTGAAATGATCGGCATGGCTGTGCATCGTAATTTGCTTTGTCTTCGTGGTTTTTGTGTGACATCTACTGAACGTTTGCTTGTGTATCCTTTAATGGCTAATGGAAGTTTAGCGTCGTGCTTACAAGAACGTAATGCCTCTCAACCGCCACTTGATTGGCCAATGAGGAAGAATATTGGGCTGGGAGCTGCCAAGGGGCTGGCTTACTTGCATGATCATTGTGATCCTAAGGTTATTCATCGTGATGTGAAAGCAGCGAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGCTTACAAAGATACCCATGTCACTACTGCTGTTCAAGGTACACTTGGGTATATAGCACCCGAGTACCTGTCAACAGGAAAGTCTTCAGAAAAGACTGATGTTTATGGATATGGTATGATGCTTTTTGAACTAATAACTGGACAGAGTGCTTATGTTCTACGAGGTCTTGCCAAAGATGATGATGATGCGATGTTGCAAGATTGGGTTAAAGGACTTCTCATAGACAAGAAGTTGGAAACACTGGTGGATGCAAAATTAAAGGGAAATAATGATGAGGTAGAGAAGTTAATCCAAGAGGTAGAGAAGTTAATCCAAGTGGCTTTACTATGCACACAATTTTCACCTATGGAAAGACCAAAAATGTCTGAGGTGGTGAGAATGCTTGAAGGCGATGGTTTGGCTGAAAAATGGGAGCAATGGCAGAAAGAGGAGACGTACCGACAAGATTTTAACAAAAACCACATGCATCACCTTAATGCAAATTGGATAGTAGATTCAACTTCACATACCCAAGTAGATTCAACTTCACATATCCAAGTAGATTCAACTTCACATATCGAGCCAGATGAACTATCAGGTCCTAGATGA	1929	0.4101	MERVTPSSNKASFLLSTTLVLHLLLQASSNEESDMLIAFKSNLNDPNNALESWDSTLLNPCTWFHVTCSGDRVIRVDLGNANLSGILVSSLGGLSNLQYLGLYNNNITGTIPEELGNLTNLGSLDLYLNNLTGTIPNTFGKLQKLSFLRLNNNSLTGVIPISLTNVTTLQVLDVSNNNLEGDFPVNGSFSIFTPISYHNNPRMKQQKIITVPLSPSSPASSGSINTGAIAGGVAAAAALLFAAPAIAIAYWQKRKQQDHFFDVPAEEDPEVHLGQLKRFSLRELLVATDNFSNENIIGKGGFAKVYKGRLADGTLVAVKRLREERTRGGEQGGELQFQTEVEMIGMAVHRNLLCLRGFCVTSTERLLVYPLMANGSLASCLQERNASQPPLDWPMRKNIGLGAAKGLAYLHDHCDPKVIHRDVKAANILLDEEFEAVVGDFGLAKLMAYKDTHVTTAVQGTLGYIAPEYLSTGKSSEKTDVYGYGMMLFELITGQSAYVLRGLAKDDDDAMLQDWVKGLLIDKKLETLVDAKLKGNNDEVEKLIQEVEKLIQVALLCTQFSPMERPKMSEVVRMLEGDGLAEKWEQWQKEETYRQDFNKNHMHHLNANWIVDSTSHTQVDSTSHIQVDSTSHIEPDELSGPR*	643

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g0142	642	SUPERFAMILY	Protein kinase-like (PK-like)	270	576	IPR011009	-
	Mtr2g0142	642	Gene3D	Ribonuclease Inhibitor	28	210	IPR032675	-
	Mtr2g0142	642	SMART	serkin_6	291	575	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g0142	642	ProSitePatterns	Protein kinases ATP-binding region signature.	297	319	IPR017441	GO:0005524
	Mtr2g0142	642	Pfam	Protein kinase domain	292	573	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g0142	642	SUPERFAMILY	L domain-like	30	195	-	-
	Mtr2g0142	642	Pfam	Leucine rich repeat N-terminal domain	30	69	IPR013210	-
	Mtr2g0142	642	Pfam	Leucine rich repeat	120	179	IPR001611	GO:0005515
	Mtr2g0142	642	MobiDBLite	consensus disorder prediction	620	642	-	-
	Mtr2g0142	642	PANTHER	BNAA08G11770D PROTEIN	14	623	IPR031048	GO:0004675\|GO:0005102\|GO:0006468
	Mtr2g0142	642	Coils	Coil	533	553	-	-
	Mtr2g0142	642	Gene3D	Transferase(Phosphotransferase) domain 1	372	595	-	-
	Mtr2g0142	642	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	418	430	IPR008271	GO:0004672\|GO:0006468
	Mtr2g0142	642	Gene3D	Phosphorylase Kinase; domain 1	260	370	-	-
	Mtr2g0142	642	ProSiteProfiles	Protein kinase domain profile.	291	585	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g0142	642	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	14	623	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g0142	Mtr-Chr2	1460041	1466500	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g0142	19	642	Receptor kinase-like Gene Family	AT4G33430	66.716	0.0	830

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Mtr2g0142		Pkinase	3.2e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g0142	K13416		-	gmx:100800522	871.307