Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0140 ATGAATATAAACATGGAGCAAGCTTCATTTCTTTTTTGGGCTATTTTGGTGCTTCATTTGCTGCTTAAAGCTTCTTCCAATGAAGAAAGTGATGCCCTGAATGCATTGAAGAACAGCTTGAATAATCCTCCTAACAATGTTTTTGACAATTGGGATACTACCCTTGTCAATCCTTGCACGTGGTTTCATGTTGGATGCAATGATGATAAAAAAGTGATCAGCGTGGATCTTGGAAATGCAAACCTTTCTGGTACACTGGTTTCACAACTTGGCGATCTCTCAAATTTACATAAATTGGAACTTTTTAATAATAATATAACAGGAAAAATCCCAGAAGAGCTAGGAAAATTGACAAACTTGGAGAGCTTGGATCTTTACTTGAACAATTTAAGTGGTACCATACCGAATACATTGGGAAACCTTCAAAAACTAAAATTCCTGCGTCTCAATAATAACAGCTTGACTGGAGGCATTCCCATTTCTTTGGCAAAGGTTACTACGCTGCAAGTTCTTGATCTCTCAAGCAACAATCTAGAAGGAGATGTCCCCAAGAGTGGTTCGTTTTTATTATTTACTCCTGCTAGTTATCTGCATACTAAATTGAACACATCATTAATCATCCCTGCACCACTTTCTCCACCGTCACCAGCTTCTTCAGCTAGCAGTGATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCGGCTCTGCTGTTTGCAGCCCCTGCAATTGCACTTGTTTTTTGGCAAAAAAGAAAACCACAGGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCGCTGCGTGAGCTGCTAGTAGCAACAGATAACTTCAGCAACGAAAACATTCTAGGTAGAGGTGGATTCGGAAAGGTTTACAAAGGACGCTTAGCTGACGGTACTCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCGCACAAGGTGGGGAGCTGCAATTCCAGACAGAAGTGGAAATAATCAGCATGGCTGTGCATCGTAATTTGCTTCGGCTTCGTGGTTTTTGCATGACATCCACCGAACGTTTGCTCGTGTATCCTTTAATGGTTAATGGAAGTGTAGCATCAAGTTTACGAGAACGTAATGACTCTCAGCCGCCGCTTGAGTGGCCAATGCGGAAGAATATTGCGCTGGGAGCTGCCAGGGGGCTTGCTTACTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTGAAAGCAGCGAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGCTTACAAAGATACCCATGTCACTACTGCTGTTCGAGGTACACTTGGGCATATACCCCCTGAGTACCTGTCAACCGGAAAGTCTTCAGAAAAGACTGATGTTTTTGGATATGGCACGATGCTTCTAGAACTGACAACTGGAAAGAGGGCTTTTGATCTAGCACGTCTTGCCGGTGATGATGATGTGATGTTGCATGACTGGGTTAAAGGACATCTCATAGACAAAAAGTTGGAAACACTGGTAGATGCGGAGTTAAAGGGAAATTACGATGATGAAGAGATAGAAAAGCTAATTCAAGTTGCTTTAATATGCACACAAGGGTCCCCTATGGAAAGGCCTAAGATGTCTGAGGTGGTTAGAATGCTAGAAGGCGATGGTTTGGCAGAAAAATGGGAGCAATGGCAAAAAGAAGAGACGTACCGACAAGATTTTAACAACAACCACATGCATCACCCTAATGCAAATTGGATAGTAGTAGATTCAACTTCACATATTCAGCCAGATGAACTCTCAGGTCCTAGATGA 1848 0.4221 MNINMEQASFLFWAILVLHLLLKASSNEESDALNALKNSLNNPPNNVFDNWDTTLVNPCTWFHVGCNDDKKVISVDLGNANLSGTLVSQLGDLSNLHKLELFNNNITGKIPEELGKLTNLESLDLYLNNLSGTIPNTLGNLQKLKFLRLNNNSLTGGIPISLAKVTTLQVLDLSSNNLEGDVPKSGSFLLFTPASYLHTKLNTSLIIPAPLSPPSPASSASSDTGAIAGGVAAGAALLFAAPAIALVFWQKRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELLVATDNFSNENILGRGGFGKVYKGRLADGTLVAVKRLKEERAQGGELQFQTEVEIISMAVHRNLLRLRGFCMTSTERLLVYPLMVNGSVASSLRERNDSQPPLEWPMRKNIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMAYKDTHVTTAVRGTLGHIPPEYLSTGKSSEKTDVFGYGTMLLELTTGKRAFDLARLAGDDDVMLHDWVKGHLIDKKLETLVDAELKGNYDDEEIEKLIQVALICTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKEETYRQDFNNNHMHHPNANWIVVDSTSHIQPDELSGPR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0140 615 Gene3D Transferase(Phosphotransferase) domain 1 366 583 - -
Mtr2g0140 615 Pfam Protein kinase domain 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0140 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Mtr2g0140 615 PANTHER BNAA08G11770D PROTEIN 9 615 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mtr2g0140 615 SMART serkin_6 289 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0140 615 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Mtr2g0140 615 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mtr2g0140 615 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Mtr2g0140 615 Gene3D Phosphorylase Kinase; domain 1 258 364 - -
Mtr2g0140 615 ProSiteProfiles Protein kinase domain profile. 289 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0140 615 SUPERFAMILY L domain-like 27 191 - -
Mtr2g0140 615 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 615 - -
Mtr2g0140 615 SUPERFAMILY Protein kinase-like (PK-like) 268 564 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0140 Mtr-Chr2 1446405 1451861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0140 11 615 Receptor kinase-like Gene Family AT4G33430 71.407 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr2g0140 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0140 K13416 - gmx:100800522 942.954