Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0139 ATGATCACAGTATCTTATGATGAGGTTGTCACAGGTGAGCCTGAACCCACTCTAGCTAGCTTGGTTATATACCATGATATCGTGAATGTGGACTATATAAAACATGGAGAGAGTGATACCCTTATTGCATTGAAGAGCAACTTAAATGATCCTAACAGTGTTTTTCAAAGTTGGAATGCTACCAATGTCAATCCCTGCGAGTGGTTTCATGTTACATGCAATGATGATAAAAGTGTGATCCTTATTGATCTTGAAAATGCAAACCTTTCTGGTACCCTGATTTCAAAATTTGGTGATCTTTCAAATTTGCAGTACTTGGAGCTTTCTAGTAATAATATAACAGGAAAAATCCCAGAAGAGTTAGGAAATTTGACAAACTTAGTGAGCTTGGATCTTTACTTGAACCATTTAAGCGGTACCATACTGAATACATTGGGCAACCTTCACAAACTATGTTTCCTGCGTCTCAACAATAACAGCTTGACTGGAGTCATTCCCATTTCTTTGTCAAATGTTGCTACGCTGCAAGTTCTCGATCTCTCAAACAACAATCTAGAAGGGGATATCCCAGTGAATGGTTCATTTTTATTATTTACCTCTTCCAGTTATCAAAATAATCCTCGTTTGAAACAACCAAAAATCATTCATGCACCACTTTCTCCAGCATCATCAGCTTCTTCAGGTAACAGTAATACTGGAGCTATTGCTGGAGGAGTTGCTGCAGGTGCTGCTCTGTTGTTCGCAGCTCCAGCAATTGCACTTGTTTATTGGCAAAAAAGAAAACAATGGGGTCATTTCTTTGACGTTCCTGCTGAGGAGGATCTTGAACACCTTGTTCAGATTACAAGGTTTTCTCTACGTGAACGGCTAGTAGAAACAGATAACTTCAGTAACGAAAACGTTCTAGGTAGAGGTAGATTTGGAAAGGTTTACAAAGGTCACTTAACTGATGGCACTCCTGTAGCAATACGAAGACTTAAAGAGGAACGCGTCGCGGGTGGAAAGCTGCAGTTTCAAACTGAAGTTGAATTGATCAGCATGGCTGTGCATCATAATTTGCTTCGCCTTCGTGATTTTTGCATGACACCTACTGAACGCTTGCTTGTGTATCCTTACATGGCTAATGGAAGTGTATCGTGTTTACGAGAACGTAATGGCTCTCAACCTCCGCTTGAGTGGCCAATGCGGAAAAATATTGCGTTGGGATCTGCCAGGGGGATTGCTTACTTGCATTATAGTTGTGACCCTAAGATTATTCACCGTGATGTGAAAGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAATTGTTGGAGATTTTGGTTATGCAATGCTTATGGATTACAAAGATACCCATGATACTACTGCTGTCTTTGGTACGATTGGGCATATAGCACCTGAATATCTCTTAACTGGAAGGTCTTCAGAAAAGACCGATGTTTTTGCATATGGTGTGATGCTTCTTGAACTAATAACTGGACCGAGGGCTTCTGATCTAGCACGTCTTGCTGATGATGATGTGATATTGCTTGATTGGGTTAAAGGACTTCTTAAAGAGAAGAAGTTCGAAACACTGGTAGATGCAGAGTTAAAGGGAAATTATGATGATGATGAGGTAGAGCAGTTAATCCAAGTTGCTTTACTATGCACACAAGGGTCCCCTATGGAAAGACCTAAGATGTCTGAGGTGGTGAGAATGCTAGAAGGCGATGGTTTGGCCGAAAAATGGATGCAATGGCAGAAAGAAGAGAAGTACTGA 1761 0.4055 MITVSYDEVVTGEPEPTLASLVIYHDIVNVDYIKHGESDTLIALKSNLNDPNSVFQSWNATNVNPCEWFHVTCNDDKSVILIDLENANLSGTLISKFGDLSNLQYLELSSNNITGKIPEELGNLTNLVSLDLYLNHLSGTILNTLGNLHKLCFLRLNNNSLTGVIPISLSNVATLQVLDLSNNNLEGDIPVNGSFLLFTSSSYQNNPRLKQPKIIHAPLSPASSASSGNSNTGAIAGGVAAGAALLFAAPAIALVYWQKRKQWGHFFDVPAEEDLEHLVQITRFSLRERLVETDNFSNENVLGRGRFGKVYKGHLTDGTPVAIRRLKEERVAGGKLQFQTEVELISMAVHHNLLRLRDFCMTPTERLLVYPYMANGSVSCLRERNGSQPPLEWPMRKNIALGSARGIAYLHYSCDPKIIHRDVKAANILLDEEFEAIVGDFGYAMLMDYKDTHDTTAVFGTIGHIAPEYLLTGRSSEKTDVFAYGVMLLELITGPRASDLARLADDDVILLDWVKGLLKEKKFETLVDAELKGNYDDDEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWMQWQKEEKY* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0139 586 ProSiteProfiles Leucine-rich repeat profile. 174 197 IPR001611 GO:0005515
Mtr2g0139 586 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Mtr2g0139 586 Pfam Leucine rich repeat 82 137 IPR001611 GO:0005515
Mtr2g0139 586 Gene3D Transferase(Phosphotransferase) domain 1 373 586 - -
Mtr2g0139 586 Gene3D Phosphorylase Kinase; domain 1 266 372 - -
Mtr2g0139 586 Gene3D Ribonuclease Inhibitor 34 217 IPR032675 -
Mtr2g0139 586 ProSiteProfiles Leucine-rich repeat profile. 102 125 IPR001611 GO:0005515
Mtr2g0139 586 Pfam Protein kinase domain 297 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0139 586 PANTHER BNAA08G11770D PROTEIN 21 585 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mtr2g0139 586 SMART serkin_6 296 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0139 586 SUPERFAMILY L domain-like 38 200 - -
Mtr2g0139 586 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 585 - -
Mtr2g0139 586 ProSiteProfiles Protein kinase domain profile. 296 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0139 586 SUPERFAMILY Protein kinase-like (PK-like) 276 569 IPR011009 -
Mtr2g0139 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0139 Mtr-Chr2 1441059 1446262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0139 16 586 Receptor kinase-like Gene Family AT4G33430 67.685 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr2g0139 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0139 K13416 - gmx:100800522 801.971