Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0122 ATGGTTGGAAGTGCTGATGTTTTGGTCAATGGTTTGAGCACTAATGGAGCAGTCGAACTATTGCCTGATGATTTTGATGTGTCAGCCATCATCAAAGATCCAGTGCCTCCTGTAGTTGCTGCAGACAACGGCATTGGCAAGGAGGAGGCAAAAATCAATGGAGGAAAAGAGAAAAGAGAAATAGTTCTGGGAAGAAATATTCACACCACGTGTCTAGAAGTCACGGAGCCAGAAGCAGATGATGAAATTACCGGCGATCGTGATGCTCATATGGCAAGTGTGCTGGCCAGATACAGAAAATCCTTAACTGAAAGGACAAAGTATCATTTAGGCTACCCCTACAATTTGGATTTCGATTATGGCGCACTCTCTCAACTTCAGCACTTTTCCATAAACAACCTTGGAGATCCTTTCATTGAAAGCAATTACGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTCTGGATTGGTTTGCCAGATTGTGGGAACTGGAGAAAAATGAGTACTGGGGGTATATAACAAACTGTGGCACAGAAGGCAATCTCCACGGCATCTTAGTTGGGAGAGAGGTATTACCAGATGGGATTTTGTATGCCTCACGAGAGTCACATTATTCAATTTTTAAAGCTGCCCGTATGTACAGAATGGAATGTGAAAAGGTTGAGACTCTTAATTCTGGCGAGATTGATTGTGATGATTTCAAGGCCAAACTTCTTCGCCACCAAGACAAACCAGCAATTATAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTCATACAAAAACTTGAAGAAGCTGGGTTTTCACAGGACAGGTTCTACATCCACGTTGATGGAGCTTTGTTTGGTCTCATGATGCCTTTTGTGAAACGAGCTCCAAAAGTTACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCAATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCATATTAATGCTCTTTCCAGGAATGTGGAATACCTTGCTTCTAGGGATGCGACTATCATGGGTAGTCGAAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAACCGGAAAGGATACAGAGGCTTTCAGAAAGAAGTGCAGAAATGCTTGCGGAATGCACACTACTTCAAAGACCGCCTTATCGAGGCTGGGATTGGTGCAATGCTTAATGAGCTTAGCAGCACGGTTGTATTTGAGCGACCACATGATGAAGAATTTATACGCAAGTGGCAGTTAGCATGCAAGGGGAACATCGCTCATGTGGTGGTGATGCCAAACGTCACTATTGAGAAGCTTGATGATTTTCTAAACGAGCTTGTGCAGAAGCGTGCTACCTGGTTTGAAGATGGTACATTTCAACCGTATTGCATAGCATCAGATGTAGGTGAAAACAGTTGCCTATGTGCTCAGCATAAGTAA 1461 0.4374 MVGSADVLVNGLSTNGAVELLPDDFDVSAIIKDPVPPVVAADNGIGKEEAKINGGKEKREIVLGRNIHTTCLEVTEPEADDEITGDRDAHMASVLARYRKSLTERTKYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVLPDGILYASRESHYSIFKAARMYRMECEKVETLNSGEIDCDDFKAKLLRHQDKPAIINVNIGTTVKGAVDDLDLVIQKLEEAGFSQDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELVQKRATWFEDGTFQPYCIASDVGENSCLCAQHK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0122 486 Pfam Pyridoxal-dependent decarboxylase conserved domain 196 405 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mtr2g0122 486 Gene3D Aspartate Aminotransferase, domain 1 369 457 IPR015422 GO:0003824
Mtr2g0122 486 Gene3D - 124 368 IPR015421 GO:0003824
Mtr2g0122 486 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 310 331 IPR021115 GO:0016831
Mtr2g0122 486 PANTHER - 1 486 - -
Mtr2g0122 486 PANTHER SERINE DECARBOXYLASE 1 486 - -
Mtr2g0122 486 SUPERFAMILY PLP-dependent transferases 105 455 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0122 Mtr-Chr2 1310559 1315779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0122 209 392 Calmodulin-binding Proteins AT1G65960 26.943 8.12e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0122 K25193 - gmx:100785163 901.738