Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0113 ATGAGAGATATAAGGAAAGTAGTGCATGGATTGAAGCCAGCCATGATGATGTTGATGGTTCAAATTGCATTTGCTTCAGTAAATGTCCTCTACAAATTTGCTATAAACGATGGAATGAGTGTTAGGGTTCTTACAGCTTACCGTCTCATTTTCGCAGCAGCTACCACTATTCCACTTGCTCTTATTTTTGAAAGGAAGAATAGACCACAGTTGACTTGGAGGGTAGTTTTTATGTCATTCTTTTGTGGTCTATTTGGGGGAAGTTTATTCCAAAACCTTTATTTTGAGTCATTGGCGTTGATATCGGCAACATTTGCTTCAGCGGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTAGCCGTTTCTTTTGGTTATGAAAGATTGAATTTCCAAACGGCAGCAGGCAAAGCTAAGGTGTTGGGAACAATAACAGGAATTGGAGGGGCAATGTTGTTAACATTTCTCAAAGGTGTTGAAATTAATATATGGACCTTCCACATTAACCTCTTGCATAAGGGAAAAAATGGAACACTAGATGATAACTCCGGTAGCAAATTGCTGGGTATTTTTTTTGGTCTTGGAAGTTGCTTCTGCTTTGCCTTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAGTACCAAGGACATTATTCAAGTACAGCATTGATGTCTTTAATGGGGGCAATTCAAGCAACTCTTTTTGCCCTTTGTGTTGAGAAGGATTTGAGCCAATGGAGGTTGGGTTTGAGTATCAGGCTTCTAACTTCAGCATATTCCGGAATTGTTGCCTCTGGAATAATGGTTATCGTCATTGCATGGTGTGTAGGGATAAGAGGTCCACTATACGCCTCTGCCTTCAATCCTCTGATGCTTGTACTTGTGGCCATTGCTGGTTCTTTGATGTTGGATGAGAACCTATACTTAGGAAGTGTAATTGGAGCAATTCTAATAATGATTGGACTGTACATGGTGTTATGGGGCAAGAGCAAAGAAACGAAAAAAGAGACTCATTTAGAAATCACTTCAGAACTCCAAGAAATTCAGGTTGTTGTCACGTCCACCATAGTAGATCATGATTGTAGCAACAACAACAACACCAATTGTAAGAGCATCATTGTTGACATGGATAATAAACATGAATATGATAACTCATCAAAAGGTGAACAAGAAGGACAAGGAACTTAA 1188 0.3923 MRDIRKVVHGLKPAMMMLMVQIAFASVNVLYKFAINDGMSVRVLTAYRLIFAAATTIPLALIFERKNRPQLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGYERLNFQTAAGKAKVLGTITGIGGAMLLTFLKGVEINIWTFHINLLHKGKNGTLDDNSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYQGHYSSTALMSLMGAIQATLFALCVEKDLSQWRLGLSIRLLTSAYSGIVASGIMVIVIAWCVGIRGPLYASAFNPLMLVLVAIAGSLMLDENLYLGSVIGAILIMIGLYMVLWGKSKETKKETHLEITSELQEIQVVVTSTIVDHDCSNNNNTNCKSIIVDMDNKHEYDNSSKGEQEGQGT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0113 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Mtr2g0113 395 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Mtr2g0113 395 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Mtr2g0113 395 PANTHER WAT1-RELATED PROTEIN 12 349 IPR030184 GO:0016021|GO:0022857
Mtr2g0113 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
Mtr2g0113 395 PANTHER WAT1-RELATED PROTEIN 12 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0113 Mtr-Chr2 1233533 1236459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0113 11 366 Nodulin-like Gene Family AT1G25270 40.730 1.60e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0113 - - gmx:100809587 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0113 2 1233533 1236459 Mtr4g3226 4 45698635 45707307 PCT