Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0112 ATGAAAGGGGTATGGAATGGAGTACATGGTTTGAAACCAGTGATTCTTATGGTGTTGGTTCAAATTGCATATGCTGCTGTCAATGTGCTTTACAAACTTGCCATCAATGATGGAATGACTGTTAAAGTTGCCACTGCTTACCGTCTTGCTTTTGGTTCTGCTTTCACCGTTCCCCTTGCTCTCATTTCTGAAAGGAATAAGAGGCCAAAGCTGACTTGGAGGGTACTTTTCATGGCATTTCTTTGTGGCTTGTTTGGGGGAAGTTTATTTCAAAACCTTTTCTATGAGGCCTTGGCTTTAACATCAGCAACATTTGCATCAGCAATCTACAACCTGATTCCAGCCATCACCTTTATCATGGCCATCTCATGCGGTTTCGAAAGATTAAATTTGAGGGCAGCAGCTGGAAAGGCCAAAGTGTTAGGAACATTGATTGGAATTGGTGGGGCAATGATGTTGATATTTCTCAAAGGTTTAGAAATTAATATCTGGCCATTCCACATAAACCTTATGCATCCACATCATCAACACCAAAATAGCCACGTGGCATCAGTTCATGCTGACTTTGGTAGTAAATGGTTGGGTGTTCTGTGTGCAGTGGCAAGTTGCTTCTCTTTTGCTTTATGGCTCATTATTCAGGCTAAGATGAGCAAAGAATATCCAAGTCATTACTCAAGTACAGCTTTAATGTCTACAATGGGAGCAATACAAGCCACTGCTTTTGGTCTTTGTGTTGAAAGAGATTGGAGCCAATGGAAGTTGGGTTGGAATATCAGGCTACTAGCCGTTGCTTACTCGGGGGTTGTTGCCTCTGGATTAGTGGTTATTGTGACTTCGTGGTGCATAAAGATGAGGGGACCTTTATTTGCATCTGTCTTCAACCCTCTAATGTTATTATTTGTGACTATTGTCGCTTCTTTGATGTTGGACGAAAAATTATACTTAGGAAGTGCAATTGGAGCAGTGCTGATTGTGTGTGGGTTGTACATGGTTTTGTGGGGTAAGAGTAAAGAGATGAAAAGGATTGCTCAGTTGGTGCCATCAAAAAACACTCAAGAAGCTGAAGCTATACAAGTTGTTGTTATGTCGACACCAATGGTAGATGATCATGATAAATTACATGTTGATAATTTGTCAAAAAATGGAGAAATTAATAGTATTGGGGGTGCAGAGGTAGTAAAATGA 1185 0.4059 MKGVWNGVHGLKPVILMVLVQIAYAAVNVLYKLAINDGMTVKVATAYRLAFGSAFTVPLALISERNKRPKLTWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFASAIYNLIPAITFIMAISCGFERLNLRAAAGKAKVLGTLIGIGGAMMLIFLKGLEINIWPFHINLMHPHHQHQNSHVASVHADFGSKWLGVLCAVASCFSFALWLIIQAKMSKEYPSHYSSTALMSTMGAIQATAFGLCVERDWSQWKLGWNIRLLAVAYSGVVASGLVVIVTSWCIKMRGPLFASVFNPLMLLFVTIVASLMLDEKLYLGSAIGAVLIVCGLYMVLWGKSKEMKRIAQLVPSKNTQEAEAIQVVVMSTPMVDDHDKLHVDNLSKNGEINSIGGAEVVK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0112 394 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Mtr2g0112 394 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Mtr2g0112 394 PANTHER WAT1-RELATED PROTEIN 12 367 IPR030184 GO:0016021|GO:0022857
Mtr2g0112 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 337 - -
Mtr2g0112 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Mtr2g0112 394 PANTHER WAT1-RELATED PROTEIN 12 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0112 Mtr-Chr2 1222256 1224889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0112 11 355 Nodulin-like Gene Family AT1G25270 41.761 1.70e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0112 - - gmx:100809587 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3226 4 45698635 45707307 Mtr2g0112 2 1222256 1224889 PCT
Mtr2g0112 2 1222256 1224889 Mtr4g3227 4 45708682 45711641 PCT