Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0108 ATGGTGAAACAGAACTCAAACAATAGCAACAACTGCGAGATCATAAAACTTGAAACCTTAAACACAATAGTCATAAAACCCTCCAAACCCACACCACCACACCTTAAAACCTTCAAACTCTCTTTACTCGACCAACTTTCACCCAATATCCATGGCAACACCACTTTCTTCTACCCAAACCATTCTTCTGATTCTTCTTTCTCCCGAAAATCAAAACTTCTTCATAACTCACTCTCACAAACACTATCCCTTTTTTACCCTCTAGCCGGACGTGTCCAAGACGCCACCACCATTAACTGCACCGACGATGGCGTTTTCTTCATCGAATCACAAACCACCAGCAATCTCTCCGATATCCTCACAAACCCTAATTTCAACACGCTTGAATGCTTCCTCCCAACTACCCAAGAAAAACAAAACATGCTCTTAGTAATCCGTTTCACTTTGTTCAGTTGTGGTTCCACCGCAATTACCGTGTCCCTTACACATAAGATCGTTGACTTTAACACACTCATCACATTCCTAACCACTTGGACCGTCGTCTGCGGCGGAACACAACCGGTTTCACTCCCGGACTTAACCACTGCAGCCACTCTCTTTCCGGCGAGAGAAATTCCTGGTATGTCTGCTTCCATTAAAACTTCAACCAAAATATTCACTTCTAGAAGATTCATTTTCGAAGCTTCGAAAATAGAAGAACTCAAGAGAAAAATCAAAAGCAAAATAGAATGCCAAAACGAGCTTCAGTTTCATCCTTCTAGGGTTGAAGTTGTTCTAGCTCTCATTTGGAAATGTGCTCTTTCAGCATCTTCTCGTTCAAAAACGACGTCGTTTAAGCAGCGTTCGATATTGTTCCAAGCAGTGAACCTCCGTCCAAGAATGGACCCCACCATTCCAGAAACCGCCGTCGGAAACTTGGTGTGGCCGTTTGCGGTGACGGTAGAAGAAGAGAGCCATGTAGCGTTGCATGAGATGGTGAAAAGAATGAGGAAGGGTATAATGGAATTTATAGAAAAGAAAGCAGAGAAGTTTAAAGAGGAAGGTGGGTTTAAAGTGGTGATGGAGAGTTTGAAAGAGAGGGTTGAGATTTTGAAAGGGAATAATAAGAATGAGAATGAGGAGGGTAGTTTGGTAATTTACAAATGTTCGAGTTGGTGTAAATTTCCATTGCTTGAGTTTGACTTTGAGTGGGGAAAGCCTGTGTGGAGTTGCAGTGTGAATAATTTGGTGAGTAATACGATTGCTTTGATGGATACAAAAGATGGTGGTGGAGTTGAAGCTTTTGTTACTCTTGATGAGGATGAGATGGGGTTTTTTGAACAAGATCAAGAGTTGCTACAATATGCTTTGCTTAATCCTACAATTATCATTTGA 1374 0.417 MVKQNSNNSNNCEIIKLETLNTIVIKPSKPTPPHLKTFKLSLLDQLSPNIHGNTTFFYPNHSSDSSFSRKSKLLHNSLSQTLSLFYPLAGRVQDATTINCTDDGVFFIESQTTSNLSDILTNPNFNTLECFLPTTQEKQNMLLVIRFTLFSCGSTAITVSLTHKIVDFNTLITFLTTWTVVCGGTQPVSLPDLTTAATLFPAREIPGMSASIKTSTKIFTSRRFIFEASKIEELKRKIKSKIECQNELQFHPSRVEVVLALIWKCALSASSRSKTTSFKQRSILFQAVNLRPRMDPTIPETAVGNLVWPFAVTVEEESHVALHEMVKRMRKGIMEFIEKKAEKFKEEGGFKVVMESLKERVEILKGNNKNENEEGSLVIYKCSSWCKFPLLEFDFEWGKPVWSCSVNNLVSNTIALMDTKDGGGVEAFVTLDEDEMGFFEQDQELLQYALLNPTIII* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0108 457 Gene3D - 14 207 IPR023213 -
Mtr2g0108 457 Pfam Transferase family 16 445 - -
Mtr2g0108 457 PANTHER VINORINE SYNTHASE-RELATED 14 457 - -
Mtr2g0108 457 Gene3D - 218 449 IPR023213 -
Mtr2g0108 457 Coils Coil 354 374 - -
Mtr2g0108 457 PANTHER F21J9.9 14 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0108 Mtr-Chr2 1191351 1192724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0108 15 441 Monolignol Biosynthesis Gene Families AT5G48930 21.569 2.42e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0108 - - mtr:MTR_2g007880 880.937