Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0080 ATGAATATGTGTAATATAGTGCAGGGTTTGAAGGGTTTGAAGCCAACGTTGTTAATGATATTGGTGAAAATAGCATTTGCTTGTGCTAATGTTCTCTACAAGCTTGCTGTAAATGATGGCATGAACTTAAGGATTGTTGTTGCCTACCGTTTTATATTTGCAACTCTTTTCATAGCTCCACTTGCTTTCATTCTTGAAAGGAAGAAGAGGACAAAGTTGACTTGGACCATACTGTTTCAGTCTTTTCTTTGCGGTTTGTTTGGAGGATCATTTGTCCAAAATTTCTACTTAGAATCCTTGGCTTTAACTTCAGCAACATTTGCATCCGCAATGGCCAACCTTGTACCAGCTGTAACCTTTATCATGGTTGTTTCCTTAGGTATGGAAAAATTAAATCTAAGGACAAAGGCTGGGAAGGCAAAGATAGTGGGTACAATAATTGGAATTGGTGGAGCAATGATATTAACTTTCATTAAAGGTGTTGAAATCAAGATGGGTTCATTCCATTTAAACCTTTTGCATCACCAAAACGATGTAGGATCACATTCACATGCTACTACTATCTCCACTGGTAATACCATTTTGGGTTCTCTGTATGCCATGGTTAGTGCCATCTCTTATGCATTGTGGCTTATTATTCAGGCAAAGATGAATGAAAGATACCCTACTCATTACTCAAGTACAACGTTGATGTCTTTTTGGGCGTCACTTCTTTCTACTATGTTTGCTCTATGCTTTGATAGAGATTTGAGTCAGTGGAGATTGGGTTGGAATATTAGGCTACTAATTGTTGCTTATGCGGGTATAGTGGCTTCAGGAGCAATGGTTGTTGTAATTTCATGGTGTGTTCACATGAGAGGTCCATTGTTTGCCTCTGCTTTTAACCCTTTAGTACTTGTCATTGTGGCCTTAGCTAGTTGTACCATGTTGAATGAGAATCTATACCTTGGAAGTATTATTGGATCAGTGTTGATTGTATGTGGCTTATATGCGGTTGTGTGGGGTAAAAGTAAAGAGATGAAGAAAAATAATCAATTAGTGCCATCACAAAGCTCCAATGAATTTGACACTGTTGAAATAGTTGTGAGGCATGTGGTAGATGATAAAAGAAACCATAATAGTAACAATGGTCTCAGTAATACTTCACAAGAGGTTAAGGATAATCAAGATTCACTAGAAGCAGTTCAACATGAAAAACAAAGTGAATATCTACAAAATCAAGAGGTGTAG 1230 0.374 MNMCNIVQGLKGLKPTLLMILVKIAFACANVLYKLAVNDGMNLRIVVAYRFIFATLFIAPLAFILERKKRTKLTWTILFQSFLCGLFGGSFVQNFYLESLALTSATFASAMANLVPAVTFIMVVSLGMEKLNLRTKAGKAKIVGTIIGIGGAMILTFIKGVEIKMGSFHLNLLHHQNDVGSHSHATTISTGNTILGSLYAMVSAISYALWLIIQAKMNERYPTHYSSTTLMSFWASLLSTMFALCFDRDLSQWRLGWNIRLLIVAYAGIVASGAMVVVISWCVHMRGPLFASAFNPLVLVIVALASCTMLNENLYLGSIIGSVLIVCGLYAVVWGKSKEMKKNNQLVPSQSSNEFDTVEIVVRHVVDDKRNHNSNNGLSNTSQEVKDNQDSLEAVQHEKQSEYLQNQEV* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0080 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 338 - -
Mtr2g0080 409 MobiDBLite consensus disorder prediction 372 389 - -
Mtr2g0080 409 MobiDBLite consensus disorder prediction 370 409 - -
Mtr2g0080 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 149 - -
Mtr2g0080 409 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Mtr2g0080 409 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020|GO:0016021
Mtr2g0080 409 PANTHER WAT1-RELATED PROTEIN 14 371 IPR030184 GO:0016021|GO:0022857
Mtr2g0080 409 PANTHER WAT1-RELATED PROTEIN 14 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0080 Mtr-Chr2 923752 929093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0080 3 342 Nodulin-like Gene Family AT1G68170 45.000 3.12e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0080 - - gmx:100787839 533.102