Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr2g0061 | ATGGAGAGCAATTTCAGTTCATATAATCCTCATGACTTAGCCTCTAGCTTGAAGAGAAAGCCCCATGATCATGATGTTAAAGAAGAAGATTATTATACATCATCTTCATCTTTCAATCTAAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCAAAACAGAATTCAGTTTCCTCAAAAGGCTGGATCATATCCCCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTATTTTGGTAGCTTATTCTGCATGGGTTTATCCCTTTGAAGTTGCTTTCATGCACTCTTCTACAAATAGGAAACTCTACATTGTGGACAATATTGTTGATCTTTTCTTCGCTGTTGATATTGTTTTGACATTCTTCGTCGCATACGTAGATGGAACAACTCATCTACTTGTCAGAGATTCCAAAAAAATTGTTGTCAGGTACTTGTCAACATGGTTCATAATGGATGTGGCATCAACTATACCATATGAAGCAATAGGTTACTTTTTAACTGGCAAACACAAATTGAGTCTGCCTTACTACCTCTTAGGAATGCTCAGATTTTGGAGAATTAGACGTGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATCAGGTTCAACTATTTCTGGGTCAGATGTGCCAGGCTTCTTTCTGTAACACTTTTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATATGTACCCTCATGAAGGAAAGACATGGATTGGAGCTGTGATTCCAAACTTCAGAGAGACAAGCCCTCGGATTAGATATATTTCAGCAATTTATTGGTCCATCACTACCATGACAACTGTTGGTTATGGTGATCTTCATGCTGTCAACACCATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGACTAACTGCTTACTTGATTGGTAACATGACGAATCTTGTTGTTGAAGGAACTCGCCGCACCATGGAATTTAGAAACAGCATCGAAGCAGCATCAAACTTTGTGTGCCGAAATCGATTGCCTCCAAGGTTAAAAGAGCAGATCCTGGCTTACATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAACATCAACTAATTGAACAGCTACCGAAGTCAATATGCAAAGGCATTTGCCAGCATTTGTTTTTTCCAACTGTTGAGAAAGTCTATCTCTTCAAAGGCGTCTCAAAAGAAATCCTTTTGTCCCTAGTTGCAAAAATGAAGGCAGAGTACATACCACCTAAAGAGGATGTTATCATGCAAAATGAATCACCGGATGATGTTTACATTATAGTGTCGGGAGAAGTAGAGGTCATTGATAGTATTATAGAGAAAGAGAGAATTTTAGGCACTCTAACAATAGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGGCCTCAAAATTTTACATACAGAACCAAGACTCTAACACAGCTTCTGAGGCTGAAAACCAATAATCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACTAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATTTGAGTATCAAAGATTTAATGGTGGAAAATGTGGAGGAAGACGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCCAGCACAGGCAATGCTGCTTTTCTCGAGGAGCTTCTAAGAGCTGGTTTGGATCCCGACATAGGAGACTCAAAAGAAAAAACTCCATTGCACATAGCTGCATCAAATGGGCACGAAGAGTGTGTTAAAGTCTTGCTTAAGCATACGTGCAACATACATATAAAAGATATGAATGGTGACACTGCACTATGGTATGCTATAGCATCAAAACATCACTCAATATTCAGGATCCTCTATCAGCTATCTGCTCTTTCTGATCCATACACGGCAGGAAATCTCCTATGTACAGCAGCAAAAAGAAATGATATAACAGTAATGAATGAGCTTTTAAAGCAAGGATTAAACATTGACTCGAAAGATCGACATGGCATGACAGCTATCCAAATTGCTATGTCAGAAAATCATGTGGAGATGGTTCAGTTGCTTGTAATGAACGGCGCAGATGTTACTGATGTACATGTTCATGAATTTTCTGCATCCATCTTAAATGAAATTATGCAGAAACGTGAAATCGGACATCTAATTAATGTGAGTGAGGTCATGCCTAGTGAGTTTGTATTAAAGGTGCAAAATCAAGAAGAACATAAGCAGATTTGGGGAAGATATAATGGACTAGAGTGTCCAAGAGTAAGCATATATAGAGGTCACCCTGTAGTGAGAAGAGAAAGAGGTTTCATTGAAGCTGGAAAGTTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAACTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATACAATGGTGACAAATGAAGAAGGAGCAGAAATAGATTGTATTGATGTTATCAGAGATAATGACAAACTGTTTTTTGTTGAAGAGGCTATTGATGCATAA | 2493 | 0.3811 | MESNFSSYNPHDLASSLKRKPHDHDVKEEDYYTSSSSFNLRNVSKLILPPLGVSKQNSVSSKGWIISPMDSRYRCWESFMVILVAYSAWVYPFEVAFMHSSTNRKLYIVDNIVDLFFAVDIVLTFFVAYVDGTTHLLVRDSKKIVVRYLSTWFIMDVASTIPYEAIGYFLTGKHKLSLPYYLLGMLRFWRIRRVKQFFTRLEKDIRFNYFWVRCARLLSVTLFSVHCAGCLYYMLADMYPHEGKTWIGAVIPNFRETSPRIRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFPTVEKVYLFKGVSKEILLSLVAKMKAEYIPPKEDVIMQNESPDDVYIIVSGEVEVIDSIIEKERILGTLTIGDMFGEVGALCCRPQNFTYRTKTLTQLLRLKTNNLIEAMQIKKEDNILILKNFLQHFKQLKDLSIKDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKEKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGDTALWYAIASKHHSIFRILYQLSALSDPYTAGNLLCTAAKRNDITVMNELLKQGLNIDSKDRHGMTAIQIAMSENHVEMVQLLVMNGADVTDVHVHEFSASILNEIMQKREIGHLINVSEVMPSEFVLKVQNQEEHKQIWGRYNGLECPRVSIYRGHPVVRRERGFIEAGKLIRLPDSLEKLKTIAGEKFGFDAKDTMVTNEEGAEIDCIDVIRDNDKLFFVEEAIDA* | 831 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr2g0061 | 830 | PRINTS | Ankyrin repeat signature | 569 | 584 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | PRINTS | Ankyrin repeat signature | 681 | 695 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SUPERFAMILY | cAMP-binding domain-like | 320 | 511 | IPR018490 | - | |
| Mtr2g0061 | 830 | ProSiteProfiles | KHA domain profile. | 752 | 830 | IPR021789 | - | |
| Mtr2g0061 | 830 | Gene3D | Jelly Rolls | 360 | 534 | IPR014710 | - | |
| Mtr2g0061 | 830 | Pfam | KHA, dimerisation domain of potassium ion channel | 751 | 823 | IPR021789 | - | |
| Mtr2g0061 | 830 | ProSiteProfiles | Ankyrin repeat profile. | 568 | 600 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SUPERFAMILY | Voltage-gated potassium channels | 68 | 316 | - | - | |
| Mtr2g0061 | 830 | PANTHER | POTASSIUM CHANNEL AKT2/3-LIKE | 36 | 826 | - | - | |
| Mtr2g0061 | 830 | PRINTS | EAG/ELK/ERG potassium channel family signature | 110 | 120 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mtr2g0061 | 830 | PRINTS | EAG/ELK/ERG potassium channel family signature | 121 | 130 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mtr2g0061 | 830 | PRINTS | EAG/ELK/ERG potassium channel family signature | 263 | 280 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mtr2g0061 | 830 | PRINTS | EAG/ELK/ERG potassium channel family signature | 289 | 300 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mtr2g0061 | 830 | PRINTS | EAG/ELK/ERG potassium channel family signature | 307 | 316 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mtr2g0061 | 830 | SUPERFAMILY | Ankyrin repeat | 529 | 703 | IPR036770 | - | |
| Mtr2g0061 | 830 | PANTHER | POTASSIUM CHANNEL AKT1 | 36 | 826 | IPR045319 | GO:0005249|GO:0006813 | |
| Mtr2g0061 | 830 | Pfam | Ankyrin repeats (3 copies) | 544 | 622 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | Pfam | Ankyrin repeats (3 copies) | 635 | 693 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | Pfam | Cyclic nucleotide-binding domain | 413 | 496 | IPR000595 | - | |
| Mtr2g0061 | 830 | SMART | cnmp_10 | 393 | 510 | IPR000595 | - | |
| Mtr2g0061 | 830 | ProSiteProfiles | Ankyrin repeat region circular profile. | 665 | 692 | - | - | |
| Mtr2g0061 | 830 | Gene3D | - | 537 | 718 | IPR036770 | - | |
| Mtr2g0061 | 830 | Gene3D | - | 74 | 316 | - | - | |
| Mtr2g0061 | 830 | CDD | CAP_ED | 393 | 496 | IPR000595 | - | |
| Mtr2g0061 | 830 | ProSiteProfiles | Ankyrin repeat profile. | 665 | 697 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Mtr2g0061 | 830 | ProSiteProfiles | Ankyrin repeat region circular profile. | 568 | 599 | - | - | |
| Mtr2g0061 | 830 | Pfam | Ion transport protein | 74 | 322 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Mtr2g0061 | 830 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 393 | 512 | IPR000595 | - | |
| Mtr2g0061 | 830 | SMART | ANK_2a | 601 | 631 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SMART | ANK_2a | 568 | 597 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SMART | ANK_2a | 665 | 694 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SMART | ANK_2a | 535 | 564 | IPR002110 | GO:0005515 | |
| Mtr2g0061 | 830 | SMART | ANK_2a | 632 | 661 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr2g0061 | Mtr-Chr2 | 663277 | 670168 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr2g0061 | 12 | 573 | Ion Channels | AT4G22200 | 72.935 | 0.0 | 856 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr2g0061 | K21867 | - | gmx:100798422 | 1375.15 |