Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0052 ATGGAGAAATACGAGGTGGTTAAGGATATAGGATCTGGAAATTTTGGTGTTGCTAGACTCATGCGCCACAAAGATACCAAACAACTTGTTGCCATGAAATACATCGAACGAGGTCACAAGATTGATGAGAATGTTGCAAGGGAAATAATAAACCACAGAAGTCTTCGCCATCCTAATATTATTCGCTTCAAGGAGGTCTCTTTATTATTATTACATTCACCTTATGTTTTTAATTTGCGGTGGGTTTGTCAGAATCACCGTGATGTTTCAGTTTTGCAGGTGGTTTTGACTCCTACACATCTTGGTATAGTTATGGAGTATGCTGCTGGTGGAGAGCTCTTTGACCGAATTTGCTCTGCTGGAAGATTCAGTGAAGACGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGCCATCGAGACTTGAAGCTCGAGAACACCTTATTGGATGGCAGCCCTGCCCCACGGCTCAAAATTTGCGATTTTGGTTATTCTAAGTCTTCTCTGCTTCACTCTAGGCCTAAGTCTACAGTGGGAACCCCAGCCTACATAGCACCAGAGGTTCTTTCACGTAGAGAATATGACGGAAAGTTGGCAGATGTATGGTCTTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGATGATCCCAAAAATTTCAGGAAAACCATCAATAGAATTATGGCTGTTCAATACAAGATTCCAGATTACGTTCACATATCTCAAGAATGTAGACATCTGCTGTCTCGCATTTTTGTGGCAAGTCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCTAGAGAATTAACGGAAATGGCTCAAGCTGTTTACTACAGAAAAGAAAATCCAACTTATTCTCTACAGAGCATTGAAGACATTATGAAGATTGTTGAGGAAGCTAAAAACCCACCTCAGGCATCTAGGTCAGTTGGAGGATTTGGCTGGGGAGGAGAAGAAGATGACGACGAAATAAACGAAGCAGAGGCCGAGCTGGAAGAAGATGAGTATGAAAAGAGAGTCAAGGAGGCCCAGGAAAGCGGAGAAATCCATGTCAACTAA 1140 0.4254 MEKYEVVKDIGSGNFGVARLMRHKDTKQLVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVSLLLLHSPYVFNLRWVCQNHRDVSVLQVVLTPTHLGIVMEYAAGGELFDRICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQECRHLLSRIFVASPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTYSLQSIEDIMKIVEEAKNPPQASRSVGGFGWGGEEDDDEINEAEAELEEDEYEKRVKEAQESGEIHVN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0052 379 CDD STKc_SnRK2 3 287 - -
Mtr2g0052 379 SMART serkin_6 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0052 379 Gene3D Phosphorylase Kinase; domain 1 1 72 - -
Mtr2g0052 379 MobiDBLite consensus disorder prediction 330 379 - -
Mtr2g0052 379 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mtr2g0052 379 MobiDBLite consensus disorder prediction 343 360 - -
Mtr2g0052 379 Pfam Protein kinase domain 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0052 379 MobiDBLite consensus disorder prediction 361 379 - -
Mtr2g0052 379 Coils Coil 344 373 - -
Mtr2g0052 379 PANTHER SERINE/THREONINE KINASE 91 373 - -
Mtr2g0052 379 PANTHER SERINE/THREONINE KINASE 2 72 - -
Mtr2g0052 379 Gene3D Transferase(Phosphotransferase) domain 1 108 296 - -
Mtr2g0052 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Mtr2g0052 379 ProSiteProfiles Protein kinase domain profile. 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0052 379 SUPERFAMILY Protein kinase-like (PK-like) 1 328 IPR011009 -
Mtr2g0052 379 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 72 - -
Mtr2g0052 379 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 91 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0052 Mtr-Chr2 551021 554341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0052 3 291 CBL-interacting serine-threonine protein kinases AT4G24400 38.926 3.19e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mtr2g0052 Pkinase 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0052 K14498 - gmx:100812259 619.002