Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0044 ATGGTGAAATTCTTGAAGCCAAACAAAGCAGTGATCGTCCTACAAGGACGTTACGCTGGCAAAAAGGCTGTGATCGTGAAGAACTTTGATGATGGAACCCGTGAACGTGCTTATGGTCATTGCTTGGTTGCAGGGATCAAGAAGTATCCAGCTAAGGTGATCAAGAAGGATTCAGCTAAGAAAACTGCTAAGAAATCGCGTGTTAAGGCATTTGTTAAGTTGGTTAACTATCAGCATCTTATGCCAACACGTTACACTCTTGATGTGGATTTGAAGGAGGTTGTTACCACTGATGTTCTTCAGAGTAAGGATAAGAAGGTTACTGCTTTGAAGGAGGCCAAGAAGAGGTTCGAAGAAAGGTTCAAAACCGGGAAGAACAGATGGTTCTTCACCAAGCTCAGGTTTTGA 408 0.4289 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRERAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF* 136
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0044 135 Pfam KOW motif 7 32 IPR005824 -
Mtr2g0044 135 Pfam Ribosomal L27e protein family 52 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mtr2g0044 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mtr2g0044 135 SUPERFAMILY Translation proteins SH3-like domain 2 135 IPR008991 -
Mtr2g0044 135 Coils Coil 100 120 - -
Mtr2g0044 135 CDD KOW_RPL27 6 88 IPR041991 -
Mtr2g0044 135 ProSitePatterns Ribosomal protein L27e signature. 124 135 IPR018262 GO:0003735|GO:0005840|GO:0006412
Mtr2g0044 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 - -
Mtr2g0044 135 Gene3D - 1 135 IPR038655 -
Mtr2g0044 135 SMART kow_9 4 31 IPR005824 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr2g0044 Mtr-Chr2 491430 492348 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0044 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.926 6.82e-84 240
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0044 K02901 - csv:101212413 236.113