Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0042 ATGGAACTATCAGATTTACAAAACAACAAGCAGAAGAGAGGCACCACCAATATTCATCCCCACCACCAACAACAAGAATCATCCTCACCTTCAAATTCTCATCATCAGCAGCTTGTGGTCCCTTTTGATGGAAGGCCATCACCTTTCATTATGGGCTCCATCTCCAATATTCAACCTTCTTCAAACTCTTCTCCCTCCAATTCATCTTCTTCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCACCCACTCAACACCTCATTGATGCTTCTCTCGCAATTGCCACCAGATCTGAACCTCCTCTTCCAGATGTATCCAACAACCAAATTCAACCATTTTCTTCAACTTCAACCACCGTCACCGCTGTTGCAAATCCTCCAAAACGATCCACCAAGGACAGGCACACAAAAGTTGATGGTCGTGGACGGAGAATTCGAATGCCGGCGACATGTGCAGCAAGAGTTTTCCAGTTGACCAGAGAATTAGGCCACAAATCAGATGGTGAAACAATTGAGTGGCTTCTTCAACAAGCTGAGCCGGCGATCATTGCCGCTACCGGTACCGGAACAATCCCAGCCAATTTCTCAACGCTCAATGTCTCACTCCGTAGCAGCGGCTCTACACTCTCTGCGCCGCCTTCGAAATCAGCTCCTCTCAGTTTTCATAGCGCGCTTGCACTGGCTCATCATCCTTATGAAGAAGCTGCGTACCAACACGCGCCTCTGTTAGGGTTTCATCCTCATCAACACCACCAACAACAACTGATGAACGCTGATCAAATTGGTGAAGCACTTTCAAACGAGAATTACATGAGAAAACGGTATAGAGAAGATCTTTTCAAAGAAGATAACAACAATCAAAATGAAAGTGGTGGTGACGGTGATGGTTCTTCTTCTCCCAAAAGTTTCAAAACAAATCATCAACAACAAGATGATATGGGGGAAGGTGACGGTGGTGGTGGTGGAGCTTCTTCATCTTCTTCAATAGGTAATTCCTTTTCTGGACTTCTTCGACCATCGAATATGTTACCGGCAACAGCCATGTGGGCAACAGCAGGGAGTGGAAGTACAATTTGGATGGTACCGGTGAGTGGTGGTGCAGCAACTTCAAATTCAGAAACACAGACACAAAACATGTGGCCTTTTAATCCTCATGTACAGTCTCAAAATCAAGGAAACGCTGCTGTAACTCCGTCTCAGTTACATTTCATGCCAAGGTTCAATGTTCCAGCTTCTGGTGGTGTTGAATTTCAAGGTGGACGTGGTGGTTTACAATTGGGTTCAGCGTATCAACCATCACAGCATTTGGGATTGGCTGTGTCTGATTCCAACATGGGTATGTTTGCTGCTCTTAATGCTTATAATAGAGCTGCTCATTTCAATGTTAACAACTCTTCTGATCATCATCAACAACAGCCTCAACCTAATGATGAGAGTGGAGAAGATGCTCCTAATACCTCACAATAA 1464 0.4495 MELSDLQNNKQKRGTTNIHPHHQQQESSSPSNSHHQQLVVPFDGRPSPFIMGSISNIQPSSNSSPSNSSSSSASASASASAPTQHLIDASLAIATRSEPPLPDVSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPLSFHSALALAHHPYEEAAYQHAPLLGFHPHQHHQQQLMNADQIGEALSNENYMRKRYREDLFKEDNNNQNESGGDGDGSSSPKSFKTNHQQQDDMGEGDGGGGGASSSSSIGNSFSGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGAATSNSETQTQNMWPFNPHVQSQNQGNAAVTPSQLHFMPRFNVPASGGVEFQGGRGGLQLGSAYQPSQHLGLAVSDSNMGMFAALNAYNRAAHFNVNNSSDHHQQQPQPNDESGEDAPNTSQ* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0042 487 MobiDBLite consensus disorder prediction 116 138 - -
Mtr2g0042 487 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 487 IPR005333 GO:0003700
Mtr2g0042 487 ProSiteProfiles TCP domain profile. 130 184 IPR017887 -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 284 308 - -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 51 81 - -
Mtr2g0042 487 PANTHER TRANSCRIPTION FACTOR TCP8 18 487 - -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 1 81 - -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 461 487 - -
Mtr2g0042 487 MobiDBLite consensus disorder prediction 281 331 - -
Mtr2g0042 487 Pfam TCP family transcription factor 129 277 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0042 Mtr-Chr2 477616 479949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0042 127 443 TCP Transcription Factor Family AT1G35560 44.582 2.66e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr2g0042 TCP 6.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0042 - - adu:107482753 435.261