Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0012 ATGGTGAAAGGGGTTCCCTTGTTGTTGCTGGCTGGCCTTCTTGGCTCACTGCTGTCGCCGCAGAAGCCGTTGCTGGCTGGATACCTCGCACAGCTGACTCTTTTCACAAATTGGACAAGGCAGGCTTACAGCACTGTTTACACTGTTGCTTTGAAAAAAGTTAAATTCGCTAATATGGATCTTCAAAGTGTCCTTTTTATGGCTAGAGAAATTATTCTCCTCAGAAGGAGGCTTCATCATCCAAATTTGGAGCAACTGCATAAAATCTTCAAGCTCTGTGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCGACAATTTTTAAACCTCAACAACCTTACAAACGTGTTGTTTCTGAGACATTCAAGAATTTTCCTTCATCGGCGCTGAGCCTCTTGGAAGTCTTACTTGCTATTGAACCAAAAGACCGAGGAACTGCATCTTCAGCACTTCAGAATGAGTTCTTCACATCAAAGCCACTTCCTTGTGATCCATCAACTTTGCCAAAGTACCCACCAAGTAAGGAGTTTGCCAAACTTCGAGAAGAGGAAGCGAGAAGACGACGAGCAGCAAATAAAGGACATGTAAGACAGGAATCAGTTGGATGGAATTTTAAAGAGTCTAAAGTTGTGCCAGCACCTGATGCTAATGTTGAGATTCAGTCATCAATAGAGAAGAGACAAGGGCAGTGTAATTCAAAATGCATTAGTGAGAAGTACAATCCTGAAGAGGAAGGAGGTTATGGCTTCCCTCTTGAACCTGCAAAGTTAAGATCACGTAATATCTTCTCTCATTCGGGCCAGTCAATGCATCCAAGTGCATATGGATCGTCGCGCGATATGAATTTGAAAGAGGAAGCTGCTCTTCCTGGCCCTGATCGTGTTTTCACATCAAGAAAAATTGAATTGAGAAAACAAAATTCTTATTGGCACGGTAGTACTGCACAATTGTCAAGATTTTCTAATTCAGTTGCAATTCGAGGTGATTCACAACTTGATATGAGTGGAGACTGTAGTTTGAACTCACAGTGGTTAGAGGATCAGTTTGATATGAGATATAGTCATTTGGATGATGGTGAGTCCAATCAATTACTGGATGGAACCAAACATTCACGCAAGAAAGACTTCCATCTGTTCAGAAAGGATCGTGCCATGGGTTGTGCTCCCAAAAATGGCCACATTCTCAACTATTCTGGACCACTTCTGCCTCGAGAGGATAACCTTGAAGAGATCCTTAAGGAGCATGAAAGACAAATCCAACAAGCTGTGCGCAAAGCTCGTCTGGTTAAGGAAAATAAAAAGGCCGACAGTGAGAATGGCCAAACTGAGTCACTATTTCACTTTTACCAAGTGAGAAGTGGCAGGTGA 1380 0.4261 MVKGVPLLLLAGLLGSLLSPQKPLLAGYLAQLTLFTNWTRQAYSTVYTVALKKVKFANMDLQSVLFMAREIILLRRRLHHPNLEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKRVVSETFKNFPSSALSLLEVLLAIEPKDRGTASSALQNEFFTSKPLPCDPSTLPKYPPSKEFAKLREEEARRRRAANKGHVRQESVGWNFKESKVVPAPDANVEIQSSIEKRQGQCNSKCISEKYNPEEEGGYGFPLEPAKLRSRNIFSHSGQSMHPSAYGSSRDMNLKEEAALPGPDRVFTSRKIELRKQNSYWHGSTAQLSRFSNSVAIRGDSQLDMSGDCSLNSQWLEDQFDMRYSHLDDGESNQLLDGTKHSRKKDFHLFRKDRAMGCAPKNGHILNYSGPLLPREDNLEEILKEHERQIQQAVRKARLVKENKKADSENGQTESLFHFYQVRSGR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0012 459 PANTHER CELL DIVISION PROTEIN KINASE 83 434 - -
Mtr2g0012 459 PANTHER KINASE CDK9, PUTATIVE-RELATED 44 83 - -
Mtr2g0012 459 PANTHER KINASE CDK9, PUTATIVE-RELATED 83 434 - -
Mtr2g0012 459 SUPERFAMILY Protein kinase-like (PK-like) 83 189 IPR011009 -
Mtr2g0012 459 Gene3D Transferase(Phosphotransferase) domain 1 55 200 - -
Mtr2g0012 459 PANTHER CELL DIVISION PROTEIN KINASE 44 83 - -
Mtr2g0012 459 Coils Coil 409 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0012 Mtr-Chr2 178380 181908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0012 59 197 Core Cell Cycle Gene Families AT5G10270 42.657 4.02e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0012 - - mtr:MTR_2g005455 858.211